Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0564 ATGTGGGACAAATTCGAGGGTTTGGAGAATTTTAAGGCGTTGACAAATCATCCTTCTTCACCTACCACACAATTCTTCAGCTGCGGCGCATTTGAGTTTCTCCGGCGATCAAATCAAAGCATCAACAAGCCAGCCATGGGACACTCAAATGTTTGGAACTCTCACCCCAAGACCTACGGTCCTGGTTCCCGCACTTGCCGTGTGTGCGGGAATTCACATGGGTTGATCAGGAAGTATGGCCTTATGTGCTGCAGGCAATGCTTCCACAGCAATGCCAAGGAAATTGGCTTCATCAAGTACCGTTGA 306 0.4869 MWDKFEGLENFKALTNHPSSPTTQFFSCGAFEFLRRSNQSINKPAMGHSNVWNSHPKTYGPGSRTCRVCGNSHGLIRKYGLMCCRQCFHSNAKEIGFIKYR* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0564 101 PANTHER 40S RIBOSOMAL PROTEIN S29 46 100 IPR039744 GO:0003735|GO:0008270
Mal1g0564 101 Pfam Ribosomal protein S14p/S29e 52 101 IPR001209 GO:0003735|GO:0005840|GO:0006412
Mal1g0564 101 PANTHER RIBOSOMAL PROTEIN S14P/S29E FAMILY PROTEIN-RELATED 46 100 - -
Mal1g0564 101 Gene3D 30s Ribosomal Protein S14; Chain N 46 101 IPR043140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0564 Mal-Chr1 6427114 6428373 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0564 46 101 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.857 1.19e-34 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0564 K02980 - lsv:111921360 134.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0521 6 6634412 6635452 Mal1g0564 1 6427114 6428373 PCT