Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0555 ATGGGTGACTCTGTCAATGAAGAGCATTGCACGGGTGGTTCACTTGTTGCTTCTCCTCAGAGGGGGATAGCTTTCTTTGAAGGGGACAAAGATTTTGAGCCACCTCATGGCATTGAATTTGAATCTCATGAAGCAGCATATTCATTTTATCAAGAATATGCCAAATCTATGGGATTCACTACTTCAATTAAAAACAGCAGACGATCAAAGAAGACAAAAGAGTTTATTGATGCCAAATTCGCTTGCTCTAGGTATGGAGTAACACCTGAGTCTGATAGTAGGAGCAGTCGAAGAGCAAGTGTAAAGAAGACAGATTGCAAAGCTTGCATGCATGTGAAGAAAAATCCAGATGGAAAATGGAACATTTTTGAATTTATAAAGGAACACAATCATGAACTTTTACCAGCGTTGGCGTATCATTTTCGGATTCATAGAAATGTGAAGTTAGCTGAAAAGAATAATATTGATATCTTGCACGCCGTTAGTGAACGCACCAGAAAGATGTATGTTGAAATGTCTAGGCAATCTGGTGGCTGTCAAAACATCGGGTCTCTCGTGGACGATATGAGTTATCAGTTCGACAGAGGGCAGTATCTGGCTTTGGAAGAGGGAGATGCCCAAGTTATGCTGGAGTATTTCAAGCACATTCAAAAGGAGAATCCCAACTTCTTCTATTCTATAGATTTAAACGAGGAACAACGTTTAAGAAATATATTTTGGGTTGATGCAAAAAGTATCGATGATTATCTCAGCTTTAATGATGCAGTTTCATTTGATACTACCTACATAAAAAGCAATGATAAGTTGCCTTTTGCTCCTTTTGTTGGAGTGAACCATCACTCTCAACCTATATTGCTTGGATGTGCATTGGTTGCAGATGAGACTAAGCCAACTTTTGTTTGGTTACTGAAGACATGGCTTAGAGCGATGGGAGGGCAAGCTCCCAAAGTTATAGTCACTGATCAAGACAAAGCCTTGAAGGAAGCAATTGAAGAAGTCTTCCCAAATGTACGGCATTGCTTTTCTCTTTGGCATATATTGGAAAAGATACCTGAAAATCTGTCTTTTGTGATAAAACAGTATAAGAACTTCTTGCCGAAGTTTAACAATTGCATTTTTAAGTCTTGGACAGATGAACAGTTTGACATGAGATGGTGGGAAATAGTGACTATATTTGAACTCCATGATGATGTTTGGTTTATCTCATTGTACGAAGACCGGAAAAAGTGGGTACCGACATACATGGGGGATGTCTTTTTAGCTGGAATGTCCACACCTCAACGTTCCGAAAGTATGAACTCTTTCTTTGACAAATACATTCATAAGAAAATCACCCTTAAAGAGTTTGTGAAACAGTATGGGTTAATTCTTCAGAATAGGTATGATGAGGAAGCTATCGCAGATTTTGATACATTGCACAAACAGCCTGCACTTAAATCTCCTTCACCTTGGGAAAAACAAATGTCAACAATATATACACATGCAATATTTAAGAAATTCCAAGTTGAAGTGTTGGGTGTAGCTGGCTGTCAATCTAGGATAGAGGTTGGAGATGGAACTGTTGCGAAATTTATAGTTCAAGATTATGAGAAGGATGAAGAGTTTTTGGTAACTTGGAATGAGTTGAGCTCAGAGGTCTCTTGCTTCTGTCGATTGTTCGAATATAAAGGTTTCCTTTGCAGGCATGCATTGAGTGTTCTCCAACGGTGCGGTTGTTCAAGTGTTCCATCTCATTATATCATGAAGAGGTGGACCAAAGATGCCAAAATTAGGGAACCACAGGCAGATAGGACAAGAAGAATACAAACTAGGGCTCAACGTTATAATGATTTGTGCAAACGGGCAATCGAGTTGAGTGAAGAAGGATCATTATCCGAAGAGAGTTACAATGCTGCTAGCCGCGCACTTGTTGATGCCCTGAAGAACTGTGTACTTGTAAATAACTCTAACGACAATGGTGCAGAATCTGGCAACAATGGTTACAGTCTTCGTGAAGCAGAAGAAAATCAGAGTACCCCTGCTTCAAAACCAAGTAAGAAGAGGAACACAACTAGAAAAAGAAAGGTGCAACAAGAGCAGAGTCCTGTACTTGTCGATGCTCAAGATACCCTGCAGCAAATGGATAATCTTAGCTCGGATGCAATGTCCCTTAATGGATATTATGGTACTCAGCAGAATGTGCAAGGACTGCATGTACAGTTGAACTTAATGGAGCCGCCTCATGATGGTTACTATGTTAATCAACACAGCATGCAAGGCCTGGGTCCATTGAATTCTATGGCTCCTAGCCATGATGGATATTTTGGAACACAACAAAGCATTCATGGGATGGGAGGGCAATTGGAATATCGTCCGACAACCACTTTTGGATATAGCCTTCAGGATGAGCCTGATCCACACTTTCACAGCAACAATTCAAGAAATGCTTAG 2430 0.4012 MGDSVNEEHCTGGSLVASPQRGIAFFEGDKDFEPPHGIEFESHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSRSSRRASVKKTDCKACMHVKKNPDGKWNIFEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRQSGGCQNIGSLVDDMSYQFDRGQYLALEEGDAQVMLEYFKHIQKENPNFFYSIDLNEEQRLRNIFWVDAKSIDDYLSFNDAVSFDTTYIKSNDKLPFAPFVGVNHHSQPILLGCALVADETKPTFVWLLKTWLRAMGGQAPKVIVTDQDKALKEAIEEVFPNVRHCFSLWHILEKIPENLSFVIKQYKNFLPKFNNCIFKSWTDEQFDMRWWEIVTIFELHDDVWFISLYEDRKKWVPTYMGDVFLAGMSTPQRSESMNSFFDKYIHKKITLKEFVKQYGLILQNRYDEEAIADFDTLHKQPALKSPSPWEKQMSTIYTHAIFKKFQVEVLGVAGCQSRIEVGDGTVAKFIVQDYEKDEEFLVTWNELSSEVSCFCRLFEYKGFLCRHALSVLQRCGCSSVPSHYIMKRWTKDAKIREPQADRTRRIQTRAQRYNDLCKRAIELSEEGSLSEESYNAASRALVDALKNCVLVNNSNDNGAESGNNGYSLREAEENQSTPASKPSKKRNTTRKRKVQQEQSPVLVDAQDTLQQMDNLSSDAMSLNGYYGTQQNVQGLHVQLNLMEPPHDGYYVNQHSMQGLGPLNSMAPSHDGYFGTQQSIHGMGGQLEYRPTTTFGYSLQDEPDPHFHSNNSRNA* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0555 809 MobiDBLite consensus disorder prediction 648 678 - -
Mal1g0555 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 11 723 IPR031052 GO:0006355
Mal1g0555 809 MobiDBLite consensus disorder prediction 648 698 - -
Mal1g0555 809 Pfam FAR1 DNA-binding domain 48 135 IPR004330 -
Mal1g0555 809 Pfam MULE transposase domain 256 348 IPR018289 -
Mal1g0555 809 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Mal1g0555 809 Pfam SWIM zinc finger 537 570 IPR007527 GO:0008270
Mal1g0555 809 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 11 723 - -
Mal1g0555 809 SMART 26again6 546 573 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0555 Mal-Chr1 6361468 6364579 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g0555 MULE 2.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0555 - - gmx:100805377 1455.65