Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0549 ATGCTGCGTTTGTGCTTAAGCCCTCTCGATTTTTGCTTCCGTCGCCGTGGTGCCTCTGACTTTCTTCTCTGGCATACCGACTTAAAACCTCACGCCTCCGGTGATTTCTCCATCGCCGTTGCTCAGGCTAATTACTCCCTCGAAGATCAGAGTCAAGTCTTCACCTCTCCGTCTGCCACCTATGTTGGTGTCTACGACGGTCACGGTGGTCCCGAAGCTTCTAGATTCGTCAATAACCGTCTCTTCCCATATTTACACAAATTTGCCTCTGAGCAAGGGGGATTGTCAGCGGATGTGATAAAAAAGGCGTTTAGTAAGACCGAGGAGGACTTTTTACATTTGGTTAAGTTGTCCTTACCAATTAGTCCCCAGATTGCGTCCGTGGGATCATGTTGTCTTCTTGGTGCAATATCTAATAATATGTTGTATGTGGCCAATCTCGGAGACTCTAGAGTTGTTCTTGGTAGGAAGTATTCTGAGAAGAAGAATTGTCCGGTGGAGGCTGTGCGCTTGTCAACGGATCATAATGTAGCTGATGAGGAGGTGAGGAGAGAAGTAGAAGCTCTCCACCCTGATGATTCACACATTGTGGTTTATAGCCGTGGAGTTTGGAGGATTAAGGGCATCATACAGGTGTCTAGATCTATTGGTGATGTGTATTTGAAGAGACCAGATTTCTACAGAGACCCCATTTTTCGGCAATTTGGAAATCCTATTCCTCTGAAGCGTCCTGTAATGACAGCTGAGCCATCAATCATTATTAGGGAGCTTGAGTCAGATGATTTATTCTTAATATTTGCATCAGATGGCCTTTGGGAACAATTAAGCGATGAAGCAGCAGTTGATATTGTTTACAAATATCCAAGAGCTGGAATTGCTAAGAGACTAGTAAGAGCTGCTCTTCAGGAAGCTGCAAAGAAAAGAGAGATGAGATATGCTGACATAAAGAAAATCGACAAAGGAATTAGACGACACTTCCATGACGATATCACTGTTGTTGTTATCTATCTTGATCACCACGGAAGCTCTTCTAGTGGTGAATTTAAGCAAACTGCTGTTGGATATACAACTGCCCCTGTTGATATATTTTCTCTAAAAGCTGATGAAGCTGAGAAGAGTATGCTTGGTTCGGTTGGCTGA 1140 0.4386 MLRLCLSPLDFCFRRRGASDFLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNNRLFPYLHKFASEQGGLSADVIKKAFSKTEEDFLHLVKLSLPISPQIASVGSCCLLGAISNNMLYVANLGDSRVVLGRKYSEKKNCPVEAVRLSTDHNVADEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPIFRQFGNPIPLKRPVMTAEPSIIIRELESDDLFLIFASDGLWEQLSDEAAVDIVYKYPRAGIAKRLVRAALQEAAKKREMRYADIKKIDKGIRRHFHDDITVVVIYLDHHGSSSSGEFKQTAVGYTTAPVDIFSLKADEAEKSMLGSVG* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0549 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Mal1g0549 379 SMART PP2C_4 29 335 IPR001932 -
Mal1g0549 379 CDD PP2Cc 48 337 IPR001932 -
Mal1g0549 379 SUPERFAMILY PP2C-like 44 339 IPR036457 -
Mal1g0549 379 PANTHER ALPHABET, ISOFORM E-RELATED 4 374 - -
Mal1g0549 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
Mal1g0549 379 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 374 - -
Mal1g0549 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Mal1g0549 379 Gene3D - 26 345 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0549 Mal-Chr1 6294743 6296906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0549 1 344 PP2C-type Phosphatase Gene Family AT3G51370 55.493 6.86e-142 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0549 - K01102 gmx:100812137 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0549 1 6294743 6296906 Mal1g0549 1 6294743 6296906 ECH