Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0534 ATGATGATCGAGGGAGATAATAAGAAAAGCGATGATGGAAGCGAAGATGACAGTCCCAAAGAGTGGTTAAATCTGAGCTTAGGAGCCACTTCACTCGCAACAGCTGGAGACCCTGATTCACCATCAAGACCAGCCAAAGTTTTTTCGTGCAACTTTTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGAGGTCATCAGAACGCTCACAAAAGGGAAAGAGGTGCAGCCAGAAGATATCAATCTCAGAGTCAGAGGACGATGGCACTGATGGGCTTGTCCATGAACAACCAAATGCTTCGATCACTTGGGGTCCAGCCCCATTCACTAGTGCACAAGCCATGCAGAGGTGGAACTATGGTGACTCCAAGCTTTCAAGAAGCATATGCAGCAGGGCTCGGAATGGCATGTACACCTTTCACATCTGAGGATCATACTAATCAGGTGTGGCCGGGCAGCTTTCGTATGGTTCCACAACAGCCCCAGCCACCACAGGAGACACTAAAGCTTGATTTAGACCTCAGACTATGA 531 0.4783 MMIEGDNKKSDDGSEDDSPKEWLNLSLGATSLATAGDPDSPSRPAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQSQRTMALMGLSMNNQMLRSLGVQPHSLVHKPCRGGTMVTPSFQEAYAAGLGMACTPFTSEDHTNQVWPGSFRMVPQQPQPPQETLKLDLDLRL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0534 176 MobiDBLite consensus disorder prediction 1 19 - -
Mal1g0534 176 PANTHER ZINC FINGER PROTEIN 4-LIKE 8 176 - -
Mal1g0534 176 SUPERFAMILY beta-beta-alpha zinc fingers 45 74 IPR036236 -
Mal1g0534 176 MobiDBLite consensus disorder prediction 1 25 - -
Mal1g0534 176 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Mal1g0534 176 PANTHER ZINC FINGER PROTEIN 4-LIKE 8 176 - -
Mal1g0534 176 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Mal1g0534 176 Gene3D Classic Zinc Finger 36 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0534 Mal-Chr1 6174641 6175171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0534 41 155 C2H2 Transcription Factor Family AT1G66140 37.500 6.05e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0534 - - ahf:112779836 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0534 1 6174641 6175171 Mal1g0534 1 6174641 6175171 ECH