Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0532 ATGACACATTCAGATTTAAACTTAAGAAATGATGCTATTCCTTTTGAAGGGCAAATTTTTGAAGATGATGAATATATGAATTCTTTAACATTTCAAGATCATCAACATGAACCCTTGCCTCAAGTCAATAGCATTGATGAACGGGTTCCTTTTGAAGGGCAAATATTTGAAACTCAAGAAGATGCTTATGAATTTTATTGTTTATTTTCTAAAATAAATGGATTTTCTATTAGGCGTCATCACATATATAAATCTCGTAAAAACGAGTCTAAAGAGAATTCATCGGATGTTTATAAAAGGGAATTTGTTTGTCATCGTGGTGGTGTTGGTAAACCACGCAAAACTGTTGAAGTGGAAAGTCAAAGGAAACGAAAATCTTCAAGATGTGATTGTACTGCAAAGATGTTGGTTGCTAAGAGAACAATTGGCTTTGAGGAAAAATGGGTGGTTAAATATTTCAACAATTCTCACAACCATGAGTTATTGGATGACAAAGAGGTTCAATTTCTTCCCGCTTATCGTAACATTCCAATTGTTGATCAAAGTCGCATACTATTATTGTCCAAAGCTGGTTGCTCCGTAAGTCTTATAATGAGAGTGCTTGAGTTAGAGAAAGAAATAGGCACAGGAAATTTACCATTCTTAGAAAAAAATATCAGAAATTTTATGCAATCCCATAGTGATATTGGTAAAGAAAGCGATGCTTCAGATGTTCTCAAATTGTGCAAAAGTTTGAAAGATAAAGATGAGGCCTTCAGATATGAATTCACAATTGATGAAAGTAACAAATTGGAGCATATTGTTTGGGCACTTGGTGATTCAATTCGCGCATATGAAGCTTTTGGAGATGTTGTAGTTTTTGACACCACATACAAAATAAATCGTTATGAGATGCCACTTGGAATATGGAGTTTCCTAGCTTTTATGCAAGGAAAATATCCAAAAACCATTCTTACAGATCAAGATCTTGCAATTAAAGAAGCTATTGCAATGGAATTGCCAAACACAAAACATGCATTTTGCATATGGCATATTGTCGCAAAGCTGTCAAGTTGGTTTTCTTTTCCACTGGGATCAAGATATGATGACTTTAAACATGAGTTTCATAAGGTTGGTGTTGCTGTCAAAATTAGAAATCAAGCTGGAGAAGAGGCAAGAATGCGTCAAAAGTATCATAATCCTCATATTACAACACATTTTCCCATTGAAGAACATGTCGCATCTATACTCACACCTTATGCCTTTAAGTTGCTTCAACATGAGATTGAATTATCTATGAAGTATGCAGCAACTGAAACTGCCAAGGGCTCTTATGTTGTTCAACATCATACCAAAGTTGATGGTGGTCGTATAGTAAGTTTGATAATAGAAGAAGAGTCAATTCACTGCTCTTGTAAAGAGTTTCAATTTTCTGGAATATTATGTAGACATGCTATTCGAGTGCTAATGTTGAAAAATTATTTTTCTCTTCCATCAAAATATCTTCCTTTTCGATGGAGACAAGAAAGTTCATTGATCCCAAAATCTAGTCATGTAATCCACTGCAATGGTAGATCCTCTGCCAAATTTCAGTCTCTAATTCGATGTTTGGAAGTCGAATCATTAAAGACAAATGAACGAGAACAAGTTGCTACAAGAGAATTAGAAAATATCATCATAGAGATAAAAGGCATGCCTGAAACTCAAGAACATTTGATTGATTTGGAACCGGATGTTCCAAACAATGATGATTGTGACGTTGAAAACCCCGTTGTTTCAAAAAGAAAAGGTCGACCAAAAGGATCAAGACCAAAAGGAGGGGTTGAAGCTGCAAAAAAGCCTCGTCGCTGTCATATTCCAGATTGTGGTGGAACTAATCACGACTCGCGAAATTGTCGAAACAAAAAGAGAAAAATGGAAGTATTGCCTACTCAATCTCCTAATAAGATCATAAAGGGTTGGAAGTAG 1947 0.3518 MTHSDLNLRNDAIPFEGQIFEDDEYMNSLTFQDHQHEPLPQVNSIDERVPFEGQIFETQEDAYEFYCLFSKINGFSIRRHHIYKSRKNESKENSSDVYKREFVCHRGGVGKPRKTVEVESQRKRKSSRCDCTAKMLVAKRTIGFEEKWVVKYFNNSHNHELLDDKEVQFLPAYRNIPIVDQSRILLLSKAGCSVSLIMRVLELEKEIGTGNLPFLEKNIRNFMQSHSDIGKESDASDVLKLCKSLKDKDEAFRYEFTIDESNKLEHIVWALGDSIRAYEAFGDVVVFDTTYKINRYEMPLGIWSFLAFMQGKYPKTILTDQDLAIKEAIAMELPNTKHAFCIWHIVAKLSSWFSFPLGSRYDDFKHEFHKVGVAVKIRNQAGEEARMRQKYHNPHITTHFPIEEHVASILTPYAFKLLQHEIELSMKYAATETAKGSYVVQHHTKVDGGRIVSLIIEEESIHCSCKEFQFSGILCRHAIRVLMLKNYFSLPSKYLPFRWRQESSLIPKSSHVIHCNGRSSAKFQSLIRCLEVESLKTNEREQVATRELENIIIEIKGMPETQEHLIDLEPDVPNNDDCDVENPVVSKRKGRPKGSRPKGGVEAAKKPRRCHIPDCGGTNHDSRNCRNKKRKMEVLPTQSPNKIIKGWK* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0532 648 MobiDBLite consensus disorder prediction 569 648 - -
Mal1g0532 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 303 IPR031052 GO:0006355
Mal1g0532 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 375 569 IPR031052 GO:0006355
Mal1g0532 648 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 375 569 - -
Mal1g0532 648 SMART 26again6 461 488 IPR006564 GO:0008270
Mal1g0532 648 MobiDBLite consensus disorder prediction 595 635 - -
Mal1g0532 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 305 370 IPR031052 GO:0006355
Mal1g0532 648 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 305 370 - -
Mal1g0532 648 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 48 303 - -
Mal1g0532 648 Pfam FAR1 DNA-binding domain 64 162 IPR004330 -
Mal1g0532 648 ProSiteProfiles Zinc finger SWIM-type profile. 452 486 IPR007527 GO:0008270
Mal1g0532 648 Pfam SWIM zinc finger 457 483 IPR007527 GO:0008270
Mal1g0532 648 Pfam MULE transposase domain 303 347 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0532 Mal-Chr1 6159859 6162439 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g0532 FAR1 8.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0532 - - ccaj:109802755 674.085