Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0531 ATGGTAGCAGCGGAAGAAAAAGAAGAGAGGAGAAAACTCTTTGTAGTAGAAGATGAAGTTTGGATAAGTCTTGCTGAGAGTTGTGTTAGACATATGAAGAAACAGAGCAGAATAGCAAAAACAGAGTTGGAGAGGAAGAAGCATGAAGAGGCGGCACTGTTATGTGACAAATTAGGGTTAAGTTCTATTGTTCACTCAAGCACCCAACTCTGCAATCCTATTTCACTCAAAGCACCCAACTTTGCAATCTCGTCGGGGAACGGTCGTTTGACGGACATAGTGACAGTTGACGGTGGAGAACTGTGGTACGCTGCTGAGGATCTCCGTTTCGATGACGGAGCTCCGGCAAGCTGCTGGAATGAGGCAATACTCAAACAGCTACGATTGATCACGGCTAGAAAGGCCTACAATGCTATTAATGCCTTAGGAATCTCTGATGAAGAGTTGAAACCAGTGTTGCAAAATTTGTTTAATATGTATGATCAAAACTGGGAGCTTATTGAAGATGAAAACTACCGAGCACTTATAGATACATACTTTCAGTCAATGGAAGAAAAGCAAGAAGAACGTAAGAGAAAAGCTCCAATCAGTTGTGGTGACGGAGAAAGACCAAAACAGAAACCTCGCGCTGCTAGAGACAGAAATTTTTATCCTGGGGAATCATCATCTGCAGGGCATTGTAATAAAGATTCAATTGATGGACCTATCCATCCTAAGTTTCATCTCGAATCTGCTTCGACAAGTTACCGTGATAACATGACAGGCTTGTACCCCAAAACTAGATTATGTTCATCAACTTATTCTGAGGATAAAAAGAAATCCTTTCGATATGTCGATGACATAACAAAAGGTTCAGAAAAAGTTAAAATATCATTATTAGATGAAACTGGAAGTGAGGATATTCCGAAATTTAATTACATTCCAACTAATATGATATTTGAAAGTGCTAATGTCAATGTTTCACTTGCGCGAATTGCGGATGAGGATTGTTGCTCTGGTTGTTCAGGCGACTGTCTTTCCATGTATCCTTGTGCATGCTCTCAAGAAACCGGTGGAGAATTTGCTTACACTTCACAAGGTTTGTTGACAGAAAGGTTTTTAACAGATTCCATGTCTAGGATGATGGAACCCCAAGATAATCATCATGTGTATTGTAAAGAATGCCCAATTGAGAGGACTAAGAATGAGACCAAACCTGAACCATGCAAGGGACATATGATTAGGAAGTTTATAAAGGAGTGCTGGAGGAAATGTGGATGTGACATGCAGTGTGGAAATCGGGTAGTGCAACGAGGTATAAGCTGTAAATTGCAGGTGTTCTTGACTCCAGAAGGAAAAGGCTGGGGCGTTAGAACTCTAGAAGCTTTGCCCAAGGGATCCTTTGTCTGTGAATATGTGGGGGAAATTTTAACCAATGCAGAATTATATGAAAGGATTGTAAATAGTAGTGGCAATGACAGACATACATATCCTGTAACGCTTGATGCAGACTGGGGCTCAGAAGCTGGATTAAAGGATGAAGAGGCATTATGCTTGGATGCAACACATAATGGAAATGTTGCAAGATTCATCAATCATAGATGCTCTGATGCAAATCTAATAAACATTCCTGTTGAAGTTGAGACACCTGACCGCCACTATTATCATGATTATTGTATTGACTTTGATGATCATACTCATCCTATTAAAGCATTTCAATGTTGTTGTGGGAGCGCTCAATGCCGTGATAAGAAACAAAAAGGTGATCCCACCAATCATATGAGTAGGTGGAGCTCAACCTCCTTTGAAAGGAATTAA 1797 0.404 MVAAEEKEERRKLFVVEDEVWISLAESCVRHMKKQSRIAKTELERKKHEEAALLCDKLGLSSIVHSSTQLCNPISLKAPNFAISSGNGRLTDIVTVDGGELWYAAEDLRFDDGAPASCWNEAILKQLRLITARKAYNAINALGISDEELKPVLQNLFNMYDQNWELIEDENYRALIDTYFQSMEEKQEERKRKAPISCGDGERPKQKPRAARDRNFYPGESSSAGHCNKDSIDGPIHPKFHLESASTSYRDNMTGLYPKTRLCSSTYSEDKKKSFRYVDDITKGSEKVKISLLDETGSEDIPKFNYIPTNMIFESANVNVSLARIADEDCCSGCSGDCLSMYPCACSQETGGEFAYTSQGLLTERFLTDSMSRMMEPQDNHHVYCKECPIERTKNETKPEPCKGHMIRKFIKECWRKCGCDMQCGNRVVQRGISCKLQVFLTPEGKGWGVRTLEALPKGSFVCEYVGEILTNAELYERIVNSSGNDRHTYPVTLDADWGSEAGLKDEEALCLDATHNGNVARFINHRCSDANLINIPVEVETPDRHYYHDYCIDFDDHTHPIKAFQCCCGSAQCRDKKQKGDPTNHMSRWSSTSFERN* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0531 598 SMART preset_2 278 419 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g0531 598 ProSiteProfiles Pre-SET domain profile. 330 432 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g0531 598 MobiDBLite consensus disorder prediction 575 598 - -
Mal1g0531 598 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 261 585 - -
Mal1g0531 598 Pfam Pre-SET motif 281 427 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g0531 598 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 133 207 - -
Mal1g0531 598 SMART set_7 435 558 IPR001214 GO:0005515
Mal1g0531 598 Pfam Ubiquitin-binding WIYLD domain 132 185 IPR018848 GO:0018024
Mal1g0531 598 Pfam SET domain 447 535 IPR001214 GO:0005515
Mal1g0531 598 MobiDBLite consensus disorder prediction 186 214 - -
Mal1g0531 598 MobiDBLite consensus disorder prediction 186 231 - -
Mal1g0531 598 ProSiteProfiles SET domain profile. 435 573 IPR001214 GO:0005515
Mal1g0531 598 SUPERFAMILY SET domain 289 575 IPR046341 -
Mal1g0531 598 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 261 585 - -
Mal1g0531 598 Gene3D - 122 185 IPR043017 -
Mal1g0531 598 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 133 207 - -
Mal1g0531 598 CDD SET_SETDB-like 302 549 - -
Mal1g0531 598 Gene3D SET domain 259 553 IPR046341 -
Mal1g0531 598 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 103 598 IPR025776 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0531 Mal-Chr1 6147476 6153479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0531 411 549 C2H2 Transcription Factor Family AT2G23740 45.000 9.07e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal1g0531 Pre-SET 4.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0531 - - mtr:MTR_1g080340 568.155