Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0526 ATGGAAACCAAAGATGAACTTCAAGTAATTGACCATTTGACCACACCATCAACAACAACTGGGACCAGTTTCTCTCAGTTACTACTAGCAGATGATAATGATAATAATGATTTAGGTCTCGATGTGGACCAAACCTTTTCAACCTCTCTTTTCTCTCTTCACAACCCACCAAAAATGCTTTGTTTTGGAGACTATCAAAATGAAATTGAAACCACCAATGTGATATTAACTCCTCAAAAATCTATCATCACTTCAAGTGATTCTTCTTCTAATGCTTCTTCATGCAACCAGCACACCAACACTGGTTTCAATTCTTTGACAACAACTAAATCCAATAGTTTGCAGAAAAAGCGGAATGGGTCAGGAGGACAAGAACTTGGGACCAGAGCAGGAGCTGGAGGGCAGAAAGGTCCTAATAAAAAGACCAAAGCAGATAACCCCACTTCAACTGGAGGACATGCAAAGAAAAAAGAGAAGCTTGGTGAACGAATTGCAGCGTTACAACAACTTGTTTCACCCTTTGGCAAGACTGATACAGCTTCGGTGCTTCACGAGGCTACTGGTTACATAAGATTCTTACATGATCAAGTTCAGGTTCTGTGCTCACCATACCTGCAACCTTCACAAGTTCAATTTCAAAATCAGTCTGGGGACGGAGATAACAATGTCAATGTCAATGGAGAAGAACAAGAAGAAGAAGTGAAGAAGGATTTGAGGAGCAGGGGTTTGTGTTTGATCCCTGTTGGATGCACCTTACACGTGGCAGGTAGTAACGGTGCTGATTTTTGGTCACCTTCTACAATAGGGAACAATGTTTCACCTTCAACTATTGCTAAGCAGTAA 843 0.4104 METKDELQVIDHLTTPSTTTGTSFSQLLLADDNDNNDLGLDVDQTFSTSLFSLHNPPKMLCFGDYQNEIETTNVILTPQKSIITSSDSSSNASSCNQHTNTGFNSLTTTKSNSLQKKRNGSGGQELGTRAGAGGQKGPNKKTKADNPTSTGGHAKKKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIRFLHDQVQVLCSPYLQPSQVQFQNQSGDGDNNVNVNGEEQEEEVKKDLRSRGLCLIPVGCTLHVAGSNGADFWSPSTIGNNVSPSTIAKQ* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0526 280 CDD bHLH_AtbHLH_like 155 200 IPR045239 -
Mal1g0526 280 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Mal1g0526 280 Gene3D - 154 215 IPR036638 GO:0046983
Mal1g0526 280 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 53 258 - -
Mal1g0526 280 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 211 IPR036638 GO:0046983
Mal1g0526 280 MobiDBLite consensus disorder prediction 85 122 - -
Mal1g0526 280 MobiDBLite consensus disorder prediction 85 159 - -
Mal1g0526 280 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 53 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0526 Mal-Chr1 6014314 6016465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0526 111 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 45.283 4.75e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0526 - - mtr:MTR_1g107185 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0526 1 6014314 6016465 Mal1g0526 1 6014314 6016465 ECH