Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0485 ATGGCTATCCATAATCATCACAATCAACAACTTCAACAAAACGTTTCATCTCTTCTTGATGCTCTTTACTGTGATGAAGAAAAATGGGAAGATGATGAAGGAGAAGTTATAGATGGAGATTTATTATCATCATCATCTGAACAAAGTGATGATGTATTGGACTCTACTTCCCTTTTACCTCTGCTTTTGTTGGAACAGAACTTGTTCAATGAAGATGAAGAACTCAACACTCTTTTCTCCAAAGAAAAGACTCAACAAGAAGCTTATTATGAGGATCTGAAAAATGTGATAATGAACTTTGACTCACTCTCTCAACCTCGTCGTGAAGCTGTTGAATGGATGCTTAAAGTCAATGCTCATTATGGTTTCTCTGCTCTCACTGCAACACTTGCTGTTAATTATCTTGATAGGTTCCTTTTAGGCTTCCATTTTCAAAAGGATAAGCCATGGATGATTCAGCTTGTTGCTGTTACTTGCATCTCTTTAGCTGCTAAAGTTGAAGAAACTCAAGTTCCTCTTCTCTTAGACCTTCAAGTGCAAGATACTAAATATGTGTTTGAAGCAACGACTATTCAGAGAATGGAGCTTTTGATTCTGTCTACACTGAAATGGAAGATGCATCCTGTAACACCACACTCATTTCTAGATCACATTATAAGAAGGCTTGGATTGAAAACTAATCTTCATTGGGAGTTTCTTAGGCGCTGTGAGAATCTTCTTCTATCTGTACTTTTAGATTCAAGATTTGTTGGTTGTGTCCCTTCTGTGTTGGCCACTGCTACAATGCTGCATGTTATAGACCAGATTGAACAAAGTGATGAAAATGGTGTGGACTACAAAAATCAGCTTCTTAATGTTCTCAAAATCTGCAAGGAGAAAGTTGATGAATGTTACAATGCGATTCTTCATCTTGCAAATGCAAATGCAAATAATTATGGTCATAAACGAAAGTATGAACAAATCCCTGGTAGTCCAAGTGGCGTAATTGATGCTGTTTTTAGTTCTGATGGTTCCAACGATTCATGGACAGTGGGAGCATCATCCTATTCAACCTCAGAGCCTGTGTTTAAGAAGACCAAAAACCCAGGACAAAATGTTAATTTGTCACCGATTAACAGGGTCATTGTCGGAATTCTTGCCACTGCAACCTCTCCTTAA 1158 0.3774 MAIHNHHNQQLQQNVSSLLDALYCDEEKWEDDEGEVIDGDLLSSSSEQSDDVLDSTSLLPLLLLEQNLFNEDEELNTLFSKEKTQQEAYYEDLKNVIMNFDSLSQPRREAVEWMLKVNAHYGFSALTATLAVNYLDRFLLGFHFQKDKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEATTIQRMELLILSTLKWKMHPVTPHSFLDHIIRRLGLKTNLHWEFLRRCENLLLSVLLDSRFVGCVPSVLATATMLHVIDQIEQSDENGVDYKNQLLNVLKICKEKVDECYNAILHLANANANNYGHKRKYEQIPGSPSGVIDAVFSSDGSNDSWTVGASSYSTSEPVFKKTKNPGQNVNLSPINRVIVGILATATSP* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0485 385 ProSitePatterns Cyclins signature. 107 138 IPR006671 -
Mal1g0485 385 SMART cyclin_7 112 200 IPR013763 -
Mal1g0485 385 Gene3D - 208 300 - -
Mal1g0485 385 PANTHER CYCLIN D3.1 PROTEIN 40 358 - -
Mal1g0485 385 CDD CYCLIN 107 199 IPR013763 -
Mal1g0485 385 Pfam Cyclin, C-terminal domain 209 320 IPR004367 -
Mal1g0485 385 PANTHER CYCLINS 40 358 IPR039361 -
Mal1g0485 385 Gene3D - 101 207 - -
Mal1g0485 385 SMART Cyclin_C_2 209 327 IPR004367 -
Mal1g0485 385 Pfam Cyclin, N-terminal domain 88 206 IPR006671 -
Mal1g0485 385 SUPERFAMILY Cyclin-like 72 207 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0485 Mal-Chr1 5604345 5606315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0485 1 304 Core Cell Cycle Gene Families AT4G34160 56.908 3.40e-112 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0485 K14505 - gmx:547740 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0485 1 5604345 5606315 Mal1g0485 1 5604345 5606315 ECH
Mal2g1178 2 13802082 13803424 Mal1g0485 1 5604345 5606315 ECH