Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0467 ATGGGGACCAAGGCAAAGAAAGCTATGACGAAGAAGAGTTTGAAAAGGGTTAATGCTATTAATAACAAACCATCTGAGCCTGCTGCTGATTATTTGCCGTTGGAAGATGGTCCTGGTGGCAAAATTCCTGAACAGAAACCACTGGAGAAAGCTTCCTCTGTTTTGTATATTGGTCGGATTCCACATGGCTTCTATGAGAAGGAGATGGAATCTTATTTTGGACAATTTGGTACCATCAAGAGAATGAGAATTGCCAGAAATAAAAAGACCGGAAAATCAAAACATTTTGGGTTCATAAAATTTGAATCTCCAGAGGTTGCAAAAATTGTTGCCGATACTATGCACAATTATTTACTTTTCGAACACCTTCTTCAGGTGTTCGTGGTACCTTCGGAACATGTTCATCCCAGATTATGGAAAGGATTCAATTACCGTTACAAGCCATTGGACTCTCTCCAAATTGAACGAGAGCGACATGATAAGGAAAGAACATTGGAAGAACACAAAAAGTTGGTTGATCGTGTTATGAAACGTGACAAAAAACGACGTAAAAGGATAGAGGCTGCTGGCATTGATTATGAATGTCCTGAGATTGTTGGTAACATCCAGTCTGCTCCAAAGAAGATAAAGTTCGAAGACTGA 642 0.3956 MGTKAKKAMTKKSLKRVNAINNKPSEPAADYLPLEDGPGGKIPEQKPLEKASSVLYIGRIPHGFYEKEMESYFGQFGTIKRMRIARNKKTGKSKHFGFIKFESPEVAKIVADTMHNYLLFEHLLQVFVVPSEHVHPRLWKGFNYRYKPLDSLQIERERHDKERTLEEHKKLVDRVMKRDKKRRKRIEAAGIDYECPEIVGNIQSAPKKIKFED* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0467 213 CDD RRM_NIFK_like 54 126 - -
Mal1g0467 213 PANTHER - 1 212 - -
Mal1g0467 213 Coils Coil 154 174 - -
Mal1g0467 213 SUPERFAMILY RNA-binding domain, RBD 53 202 IPR035979 GO:0003676
Mal1g0467 213 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 1 212 - -
Mal1g0467 213 SMART rrm1_1 54 127 IPR000504 GO:0003723
Mal1g0467 213 Gene3D - 4 127 IPR012677 -
Mal1g0467 213 MobiDBLite consensus disorder prediction 1 44 - -
Mal1g0467 213 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 55 122 IPR000504 GO:0003723
Mal1g0467 213 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 53 131 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0467 Mal-Chr1 5384794 5387332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0467 44 119 Eukaryotic Initiation Factors Gene Family AT2G36660 35.526 2.46e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0467 K14838 - gmx:100814276 321.242