Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal1g0467 | ATGGGGACCAAGGCAAAGAAAGCTATGACGAAGAAGAGTTTGAAAAGGGTTAATGCTATTAATAACAAACCATCTGAGCCTGCTGCTGATTATTTGCCGTTGGAAGATGGTCCTGGTGGCAAAATTCCTGAACAGAAACCACTGGAGAAAGCTTCCTCTGTTTTGTATATTGGTCGGATTCCACATGGCTTCTATGAGAAGGAGATGGAATCTTATTTTGGACAATTTGGTACCATCAAGAGAATGAGAATTGCCAGAAATAAAAAGACCGGAAAATCAAAACATTTTGGGTTCATAAAATTTGAATCTCCAGAGGTTGCAAAAATTGTTGCCGATACTATGCACAATTATTTACTTTTCGAACACCTTCTTCAGGTGTTCGTGGTACCTTCGGAACATGTTCATCCCAGATTATGGAAAGGATTCAATTACCGTTACAAGCCATTGGACTCTCTCCAAATTGAACGAGAGCGACATGATAAGGAAAGAACATTGGAAGAACACAAAAAGTTGGTTGATCGTGTTATGAAACGTGACAAAAAACGACGTAAAAGGATAGAGGCTGCTGGCATTGATTATGAATGTCCTGAGATTGTTGGTAACATCCAGTCTGCTCCAAAGAAGATAAAGTTCGAAGACTGA | 642 | 0.3956 | MGTKAKKAMTKKSLKRVNAINNKPSEPAADYLPLEDGPGGKIPEQKPLEKASSVLYIGRIPHGFYEKEMESYFGQFGTIKRMRIARNKKTGKSKHFGFIKFESPEVAKIVADTMHNYLLFEHLLQVFVVPSEHVHPRLWKGFNYRYKPLDSLQIERERHDKERTLEEHKKLVDRVMKRDKKRRKRIEAAGIDYECPEIVGNIQSAPKKIKFED* | 214 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal1g0467 | 213 | CDD | RRM_NIFK_like | 54 | 126 | - | - | |
Mal1g0467 | 213 | PANTHER | - | 1 | 212 | - | - | |
Mal1g0467 | 213 | Coils | Coil | 154 | 174 | - | - | |
Mal1g0467 | 213 | SUPERFAMILY | RNA-binding domain, RBD | 53 | 202 | IPR035979 | GO:0003676 | |
Mal1g0467 | 213 | PANTHER | MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN | 1 | 212 | - | - | |
Mal1g0467 | 213 | SMART | rrm1_1 | 54 | 127 | IPR000504 | GO:0003723 | |
Mal1g0467 | 213 | Gene3D | - | 4 | 127 | IPR012677 | - | |
Mal1g0467 | 213 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Mal1g0467 | 213 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 55 | 122 | IPR000504 | GO:0003723 | |
Mal1g0467 | 213 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 53 | 131 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal1g0467 | Mal-Chr1 | 5384794 | 5387332 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal1g0467 | 44 | 119 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 35.526 | 2.46e-07 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal1g0467 | K14838 | - | gmx:100814276 | 321.242 |