Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0451 ATGAAAAATATTAGCAACAAGAGTAACCTACAAGTGACTTTCTCAAAGCGTCGTAGTAGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACCCTTTGCGGTGCAGATGTTGCTCTCGTTGTATTCTCACCTAGTGAGAAGGCATTTTCCTTTGGTAACCCCAATGTTGATATGGTCATAGATCGCTATCTCTATTGGGACCCACCCCAAAATAACAACATCATGCAATTCATTGAGGATCACCAGAGCATCAACGTCTGTGAGCTAAATACTCTGTTGACTTACATTAATAACACATTGGACAGTGAGAAAAAGTCTAGCGACGAGCTGAGCCTCTTGCGCAAAGCGACCGAGGCTCGATTTTGGTGGACTTGTCCAGTTGATGGGATGAATAAGGCGCAACTTGAATTATTCAAGAAGGCTTTGGAGGAACTTAAGAAACTTGTTGCACAACATGTTGATAGGGTTGTATCTCGGGTCTCTGGCTCTACAAGATGTTGCCAGAAGAAGATAAAGCTTGAAAAAGTTGCCTCTATGTTAGAGAGTGCAGCTGATTCTCATGTTGTTGCAGGAAGTGAACCAGGACTTACGACGGTAGATAAAGCTTGTAGTTTGAGAGAGACCAATACCTATGACCATGGCTTACTTTTCGACGAGGAGATTCATGCCACTGGGAGTTCAGCATTTTCCAACAGGTCAACAAGAAGTTATTTGGAGAAGCAATGCTTGTTCCACGCAGATTCAGGTTGCAGTACTACAGGGAATGGTTATCTATAA 774 0.4315 MKNISNKSNLQVTFSKRRSRLFKKASELCTLCGADVALVVFSPSEKAFSFGNPNVDMVIDRYLYWDPPQNNNIMQFIEDHQSINVCELNTLLTYINNTLDSEKKSSDELSLLRKATEARFWWTCPVDGMNKAQLELFKKALEELKKLVAQHVDRVVSRVSGSTRCCQKKIKLEKVASMLESAADSHVVAGSEPGLTTVDKACSLRETNTYDHGLLFDEEIHATGSSAFSNRSTRSYLEKQCLFHADSGCSTTGNGYL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0451 257 SUPERFAMILY SRF-like 1 70 IPR036879 GO:0003677|GO:0046983
Mal1g0451 257 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL23-RELATED 3 151 - -
Mal1g0451 257 Coils Coil 134 154 - -
Mal1g0451 257 PANTHER MADS BOX PROTEIN 3 151 - -
Mal1g0451 257 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 4 50 IPR002100 GO:0003677|GO:0046983
Mal1g0451 257 Gene3D - 6 76 IPR036879 GO:0003677|GO:0046983
Mal1g0451 257 Gene3D - 77 184 - -
Mal1g0451 257 SMART madsneu2 1 53 IPR002100 GO:0003677|GO:0046983
Mal1g0451 257 PRINTS MADS domain signature 31 52 IPR002100 GO:0003677|GO:0046983
Mal1g0451 257 PRINTS MADS domain signature 16 31 IPR002100 GO:0003677|GO:0046983
Mal1g0451 257 ProSiteProfiles MADS-box domain profile. 1 54 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0451 Mal-Chr1 5222055 5224443 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0451 1 154 Type I MADS-box Gene Family AT5G60440 54.140 2.83e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mal1g0451 SRF-TF 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0451 - - mtr:MTR_1g106070 197.978