Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0422 ATGGGTTTACAAAACCAGCTAAACGACGTGTCGTCGGATTCAATTCCGTTACTGCTTCTGATGCACATCGCCACCTGCGTCAACTACATCCGTTCGATGCTTCTCAATCTCCTCCAATCCATCGGTCTCTCACGTCTCCAAACCGATCAGATCGTCGACGACCACTTCCTCGCCGCCGTTGGATCGGGTCTCGCCGGACTCATCATGCTCTCCGATCAACTCAACCTCAACAACCAATTCTTCTACACATACGAAGACGCCGCTTCCGCCGACAATCACCGCTGCGTGTTCTGTCAATCCACCTTCGAAAACGGCGATCACGTTCGGAAGCTTCCTTGCCGCCACGTCTTCCACCGTCACTGCCTCAACGGTTGGTTCCACCGCTACAACTTCAATTGTCCGTTATGCCGCTCTTCACTACTCCCCGACGAGCGCGTGGCTCTCACCGAACGCCGTGTCGGTCGCCAACTCATCTCATGGTTCACCCTTCGCTGA 495 0.5475 MGLQNQLNDVSSDSIPLLLLMHIATCVNYIRSMLLNLLQSIGLSRLQTDQIVDDHFLAAVGSGLAGLIMLSDQLNLNNQFFYTYEDAASADNHRCVFCQSTFENGDHVRKLPCRHVFHRHCLNGWFHRYNFNCPLCRSSLLPDERVALTERRVGRQLISWFTLR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0422 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 162 - -
Mal1g0422 164 Pfam Ring finger domain 94 137 IPR001841 -
Mal1g0422 164 SUPERFAMILY RING/U-box 75 143 - -
Mal1g0422 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 142 IPR013083 -
Mal1g0422 164 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Mal1g0422 164 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHA2A 1 162 - -
Mal1g0422 164 SMART ring_2 95 136 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0422 Mal-Chr1 4921599 4922093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0422 1 163 C3H Transcription Factor Family AT1G15100 50.920 1.16e-48 152