Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal1g0403 | ATGAAGATATCCCAAAATCGCGATGATGCATTGGCAGCTTTTCAGAAGGCAGTACAAGCTGCGTTTCAAGATAGGAAGGGAAATTATTATAATGAGGTTTTAAAAGTCCTAAAAGATCAAAGAATTTATACAAGAGGTGTTGCGTCAAGAGTGAAGGAGCTGCTTAAAGGGCATTCAGATTTGATTTTGAGATTCAACACCTTCCTCCCAAAGGAACATCAAATCAAACTTCCATTTCAACCTGAGACCACTGGGAGAAAGGTGCAGAAGGTAGAAGAGAACCGTGAACTTCCCTGGGATGTGCTTGATATCATTTCCCAAGCACTAGATTTTGACGACCTTTTTCAGTTTGCCGGTGTGTGCAAGAATTGGAGGGCTTTTCATAAAATTCACCGGAGAAATTTCTTGGCATCCCAAGAACCATTAATTCTTCAAGTTTCTTATGATGATTTTGGTCGATCACTTTCCTTTATCAGCATACCCGACCAAAAAGTTTATTATCGCTTGAACATAGATGAGTGCTACGGGAAATATACCTACGCTACGTCTTCTAGCGGATATTTTATCTCGGTGGGAGGAAATAATTCAGTTTTGCTACTCAATCCATTTACAAGAATAAAGAAGGTAATCAATACATGTCCCTCTGAAGTTAAGTCTTGTTTTGATTTAAACCGTGCCGTGCTTGCTTTTGGCAAATGCTCTGAAGAATTTGTCTTGATGGTTGTTTTCAATTTTCCTGAGAGTTTGCATGTCTATCAATCTCGAAATCGTGGTTGGGTTACTTATTCGACTACAGGAAATCAAGGAAGGATTGTTGACGTTGTGGTTGTGCATAATATAATATATGTTGTCACTACCAAGGCCAACATAGGGGTCCAATGA | 882 | 0.3923 | MKISQNRDDALAAFQKAVQAAFQDRKGNYYNEVLKVLKDQRIYTRGVASRVKELLKGHSDLILRFNTFLPKEHQIKLPFQPETTGRKVQKVEENRELPWDVLDIISQALDFDDLFQFAGVCKNWRAFHKIHRRNFLASQEPLILQVSYDDFGRSLSFISIPDQKVYYRLNIDECYGKYTYATSSSGYFISVGGNNSVLLLNPFTRIKKVINTCPSEVKSCFDLNRAVLAFGKCSEEFVLMVVFNFPESLHVYQSRNRGWVTYSTTGNQGRIVDVVVVHNIIYVVTTKANIGVQ* | 294 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal1g0403 | 293 | PANTHER | OS06G0113600 PROTEIN | 87 | 293 | - | - | |
Mal1g0403 | 293 | Pfam | F-box domain | 96 | 126 | IPR001810 | GO:0005515 | |
Mal1g0403 | 293 | PANTHER | OS06G0113600 PROTEIN | 87 | 293 | - | - | |
Mal1g0403 | 293 | SUPERFAMILY | PAH2 domain | 12 | 71 | IPR036600 | GO:0006355 | |
Mal1g0403 | 293 | Gene3D | Paired amphipathic helix | 9 | 70 | IPR036600 | GO:0006355 | |
Mal1g0403 | 293 | ProSiteProfiles | PAH domain profile. | 1 | 72 | IPR003822 | GO:0006355 | |
Mal1g0403 | 293 | Pfam | Paired amphipathic helix repeat | 30 | 69 | IPR003822 | GO:0006355 | |
Mal1g0403 | 293 | SUPERFAMILY | F-box domain | 96 | 127 | IPR036047 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal1g0403 | Mal-Chr1 | 4624529 | 4626015 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal1g0403 | 9 | 77 | WRKY Transcription Factor Family | AT4G12020 | 48.571 | 3.72e-10 | 58.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Mal1g0403 | PAH | 4.7e-08 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal1g0403 | K11644 | - | cam:101488742 | 295.819 |