Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0384 ATGATCAGAAAAAGCCTTATGTTTACCCTCAAGCCCTTCTACTGTCCCCTGTTTTATTCATACATCATCCTTTTTTATCTTCTTACCACAACCACTCTATGCTCTATAGATACAAAATTTGAAGCTTGTGAAGCCAAAACATGTGGCAACCAAAGTATAAGCTACCCTTTCTATATCAAAGGATTACAACAACCCTATTGTGGCTACCCTGGTTTTGGTCTCTCTTGTGACAATACTATTGGTTTCCCAATCCTCAATCTTTCTAATACAGAATACATAATCGACCAAATTTTCTATCAAAGTCAATCATTAAGAGTGTCCAACAATGCTGTGCTAACTTCAGGATCAAACACCAACAAAGGTTGTTTTTCTCCTAACCGGAACCTAACTATTCCCAATAACATGTTCTATCTTTCTCCCAATCAAAGTGAAGTGATATTGTTCTTCGGATGCGACTCAACAAAGCTACCCAGAGAGCTGCAAGGGAACACAATTGGTTGTTCTGCAGAAAACGAAACAAGTTCGGTTGTGGCATTATACGAGGATGACAAAAATGCAAGCTTTGTGTCAAATAATTGCAGGGGTGGGGTGGTGAATGCGACTGTGGAAAATGATGTGAAAGGAGGGATTGAAGAGAAGCTGAGAAATGGGTTTCGGTTGAATTGGATAGCTAGTGACTGTTCCGAGTGCAGCAGAACTGGAGGAAGGTGTGGCTTTGATTCAGATATGTATAGTTTCAGATGTTACTGCACCGACAGAGTTCATGCTGCAACATGTGATACAGGAGTTGCAGCAGTCGGGAGGAAGTCTCAGTCGGTGCATACAATGACAATAGTTTGTTGCTTTAGGAAAAAGACCTTCCCTCCCACATTTCTTTTGTTCCGGAAGGACAATCCAACTCATCAAATTATTGAGAAGTTTTTGAAGGAACATGGACCACTTCCAGCTGCTAGGTACAGTTATTCAGATGTCAAGAAAATAACAAACTCTTTCAAAAACAAATTAGGGCAGGGAGGATATGGAAGTGTATACAAAGGGAAGTTACATGATGAACGTATGGTTGCTGTGAAGGTTTTAAGTGAATCAAAAGGTGATGGTGAAGATTTCATTAATGAAGTTGCAAGTATCAGTAGAACTTCACATGTTAACGTTGTTAGACTTTTGGGCTTTTGTTTGGATGGTTCGAAAAAGGCACTAATATATGAATTCATGCCTAATGGGTCGCTTGAAAAGTTCATATATGAAGAGAAAAATTCATTGAAGGATGATCGCCAATTGGATTGCAAAACATTGTATGATATTGCAGTTGGTGTTGCTCGTGGATTAGAGTACTTGCACAGAGGCTGCAACACTAGAATCTTGCATTTTGACATAAAACCTCATAATATATTACTAGATAATGATTTTTGTCCTAAAGTTTCAGATTTTGGACTAGCTAAAATATGTCCAACAAAAGAAAGCATTGTATCCATATTTGGCGCAAGGGGAACGCCAGGATATATTGCTCCAGAGTTGTTCTCCAGAAATTTTGGCGGGGTGTCACATAAATCAGATGTCTATAGTTATGGAATGATGGTTCTAGAAATGGTTGGCCGAAGAAAGAACATTAAGGTTGAAGTTGATTGTTCTAGCGAGTTATATTTTCCACACTGGATTTACAAGCGTCTTGAATTGAATCAGGATCTTGGACTCAGGTGTATTAAAAATGAAATTGATGAAGAAATGGTAAGAAAAATGACAGTGGTGAGTTTATGGTGCATACAAACCGACCCTTCACATCGACCATCAATGCATAAAGTGGTGGAAATGTTGGAAGGGAGCCTTCAAGTGCTGGAAATACCACCCAAACCCTTTTTGTCTTCTCCTTCAAAATCTTCAACTCATTTATCATCTGCAATATTGTGA 1905 0.3885 MIRKSLMFTLKPFYCPLFYSYIILFYLLTTTTLCSIDTKFEACEAKTCGNQSISYPFYIKGLQQPYCGYPGFGLSCDNTIGFPILNLSNTEYIIDQIFYQSQSLRVSNNAVLTSGSNTNKGCFSPNRNLTIPNNMFYLSPNQSEVILFFGCDSTKLPRELQGNTIGCSAENETSSVVALYEDDKNASFVSNNCRGGVVNATVENDVKGGIEEKLRNGFRLNWIASDCSECSRTGGRCGFDSDMYSFRCYCTDRVHAATCDTGVAAVGRKSQSVHTMTIVCCFRKKTFPPTFLLFRKDNPTHQIIEKFLKEHGPLPAARYSYSDVKKITNSFKNKLGQGGYGSVYKGKLHDERMVAVKVLSESKGDGEDFINEVASISRTSHVNVVRLLGFCLDGSKKALIYEFMPNGSLEKFIYEEKNSLKDDRQLDCKTLYDIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDNDFCPKVSDFGLAKICPTKESIVSIFGARGTPGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGRRKNIKVEVDCSSELYFPHWIYKRLELNQDLGLRCIKNEIDEEMVRKMTVVSLWCIQTDPSHRPSMHKVVEMLEGSLQVLEIPPKPFLSSPSKSSTHLSSAIL* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0384 634 Gene3D Transferase(Phosphotransferase) domain 1 404 618 - -
Mal1g0384 634 Gene3D Phosphorylase Kinase; domain 1 307 403 - -
Mal1g0384 634 SMART serkin_6 329 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0384 634 SUPERFAMILY Protein kinase-like (PK-like) 313 605 IPR011009 -
Mal1g0384 634 PANTHER RUST RESISTANCE KINASE LR10-RELATED 27 632 IPR045874 GO:0004672
Mal1g0384 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Mal1g0384 634 Pfam Wall-associated receptor kinase galacturonan-binding 43 107 IPR025287 GO:0030247
Mal1g0384 634 PANTHER - 27 632 - -
Mal1g0384 634 Pfam Wall-associated receptor kinase C-terminal 174 252 IPR032872 -
Mal1g0384 634 ProSiteProfiles Protein kinase domain profile. 329 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0384 634 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Mal1g0384 634 Pfam Protein kinase domain 332 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0384 Mal-Chr1 4360841 4364503 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0384 17 631 Receptor kinase-like Gene Family AT5G38260 40.659 5.16e-143 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g0384 Pkinase 8.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0384 - - gmx:100778621 790.03