Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0371 ATGTTTTCTCTTTTTCGGAAACCTTTTTGTCGCTCCTCCTCATCATCGCAAGTTCTCAAGTTTTTTATTAGGTTTAAAGCCCGTGAGTTCTCATCATTATCATCTTCTTCTCCTCCTTCGAGGAATGTCAAGGTTTTCGCATGGTGGGATGTTGACAGTTGTGGAGTGCCTTCTGACGTTAGCTTTTCTAAGGTAGCACCTTCAATTATAGCAGCCCTTAGAGCTAACGGGATCATGGGTGAGGTTAAGATTCAAGCTTGTGTCGATTTATATTCTCCAAAGGTCAACATAGAGGCAAGAGAGACACTTATGTCAACCGGCATTTCTCTCCGGCGCATTTGTGGAGCTGAAAATAACAATTCTTATACACGTCTTCTTTTGAGTCTTGAGAATTGGCTTTGCTTGAATCCTCCACCTGCACACCTCTTTTTGATAATTGGTGATGTATACTACTCTGGAATATTGAATAAGTTAAGAATGCGTAACTACAATATCTTGCTTGCGTGTCCAGAAAGGGCTCATGTTGCTCTCTACCATGCAGCAACTATAATGTGGCAATGGTCTTCACTGCTCAAGGGGGAAGATCTTATAGGAAAACATTTCAACTATCCTCCTGATGATTCGTTTAATTCTTGGTATGGAAACTCAAATGTGTCTCTTAAAAACCCATTCTCAGTTGCTGAGCTGCACACATCATCACAAAATGCGGAGATTTACAAACCTTCATCGGACATAAAGGTAGGTGAAGCTTCACAGTCAGTTTCTAGGCAGGTCATGAAGATATTGAGTTCGCACCCGAAAGGGATCTCCATTGGAGACCTTCGTGCAAAATTGACAAAGTGTGATCCGCCTTTGGGTAAAAACTTCTATGGATATAAAAAGTTAACCAACATTCTAATATCTATACCACATGTACAACTCGAGTATTTAGGAGAAGGTAATTTTTGGGTGTGTTTGGTCTCAACAAGTACATCAACTATTAAGAACAAGCAGGCGGACACCACTACAACTCAAAGGCTACACAATGATGTTAGTCATCCTCCGCAACCTCATTGGGATAACATTAGGGTTTCAGTATGGTGGGACTTTGACAGTTGTCCCGTCCCTTCCGACGTTAGCTTTTGGAATGTAGCACCTTCAATTTTGGGAGTTCTTAGAGCTAACGGGATTAAGGGACCTATTCATATTGACGCTTATGGCAATGTTTCTCATCTTTCTGAGATCCAACAAGAAGCACTTTTCTTCTCTGGCATTGATCTCCACCACATTCCTGGTGGAAAGAAAAAATCTCATAAATGGCTTATGGATTGGGCTTGTCAAAATCCTCCACCCGGACACCTCTTTCTGATATCTGGTGACAGAGACTTATACTTCCGTGGCACAACGAACCAGTTATGGACCAATGAATTCAATGTATTGCTTGCATGTCCAAGAATGGATTATCTTCGTAGCCACAATAGCGCAACCATAGTGTGGCAGTGGTCTTCAATGCTCAAGGGGAAATATCTTACTGGAAAATATTACGCTTATCCTCCTCCTTGGTATGTTAAGGTCCCTCTTGAGTATCCTCCTGAGTGGTATAGAAACTCTAAGGTGCCTCTTGAAAACCCCTTCTCAACTGTTGAGGAGCCCACATCTTCAAAAAATGCAGAGATCCAAGAACCTTCCTCGTACATAAAATTAGTTGAAGTTCCAAAGTCACTTTGCAGGCAGGTTAGGAAGATATTGAGTTCGTACCCGAATGGGATCGCCATTGGAGATCTTCACTTACAGTTCAAATTGAGTTATTTGTACCAGAATGGCTTCTATAAACAAAAAGAGTTTTCCAACATTCTAGTATCTATACCACATGTACAACTTCTGTACATAGGAGAAGGTGATTTTTGTGTGCGTTTGAATAAGCAGTGGGCAGTTAAAAATAAGCAGAGGGCAGTTAAAAATAAGCAGAGGGGTGCTGATCATCCAGGAATGCCTGCATTATTTTCTAGTGGTTCCTTTTGGGATGTTGTGGAATCTTTTGTTTTCACACCCAGAAGATCACGTCTTATTTCCCGGTCAATAAGCAGGGAGGATCTGGCTCATAAATTACAAAAGCATGGACCCTTGTTTCTTATGACTCTCACTAGAAATGATATCCTTCAATTGGTGGAATTAATGATAGCAGAGAAGAAATGGTTAGAGGAAAGCCCTTCACAAGCATTTCCTTTTAGACTAACTCGATTAGTTCAGAAGAGCTCATTGATAGGCCAATCTCATGGTGCAAATGGCTTCAGATCTCTCTAA 2283 0.4113 MFSLFRKPFCRSSSSSQVLKFFIRFKAREFSSLSSSSPPSRNVKVFAWWDVDSCGVPSDVSFSKVAPSIIAALRANGIMGEVKIQACVDLYSPKVNIEARETLMSTGISLRRICGAENNNSYTRLLLSLENWLCLNPPPAHLFLIIGDVYYSGILNKLRMRNYNILLACPERAHVALYHAATIMWQWSSLLKGEDLIGKHFNYPPDDSFNSWYGNSNVSLKNPFSVAELHTSSQNAEIYKPSSDIKVGEASQSVSRQVMKILSSHPKGISIGDLRAKLTKCDPPLGKNFYGYKKLTNILISIPHVQLEYLGEGNFWVCLVSTSTSTIKNKQADTTTTQRLHNDVSHPPQPHWDNIRVSVWWDFDSCPVPSDVSFWNVAPSILGVLRANGIKGPIHIDAYGNVSHLSEIQQEALFFSGIDLHHIPGGKKKSHKWLMDWACQNPPPGHLFLISGDRDLYFRGTTNQLWTNEFNVLLACPRMDYLRSHNSATIVWQWSSMLKGKYLTGKYYAYPPPWYVKVPLEYPPEWYRNSKVPLENPFSTVEEPTSSKNAEIQEPSSYIKLVEVPKSLCRQVRKILSSYPNGIAIGDLHLQFKLSYLYQNGFYKQKEFSNILVSIPHVQLLYIGEGDFCVRLNKQWAVKNKQRAVKNKQRGADHPGMPALFSSGSFWDVVESFVFTPRRSRLISRSISREDLAHKLQKHGPLFLMTLTRNDILQLVELMIAEKKWLEESPSQAFPFRLTRLVQKSSLIGQSHGANGFRSL* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0371 760 Pfam NYN domain 356 474 IPR021139 GO:0004540
Mal1g0371 760 Pfam NYN domain 47 173 IPR021139 GO:0004540
Mal1g0371 760 PANTHER EMB|CAB71880.1 351 650 - -
Mal1g0371 760 PANTHER EMB|CAB71880.1 646 760 - -
Mal1g0371 760 ProSiteProfiles OST-type HTH domain profile. 250 321 IPR025605 -
Mal1g0371 760 PANTHER LIMKAIN B LKAP 351 650 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal1g0371 760 CDD PIN_limkain_b1_N_like 356 477 - -
Mal1g0371 760 Gene3D - 249 320 IPR041966 -
Mal1g0371 760 CDD PIN_limkain_b1_N_like 44 170 - -
Mal1g0371 760 CDD LOTUS 253 319 - -
Mal1g0371 760 Pfam OST-HTH/LOTUS domain 252 316 IPR025605 -
Mal1g0371 760 PANTHER EMB|CAB71880.1 12 343 - -
Mal1g0371 760 PANTHER LIMKAIN B LKAP 12 343 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal1g0371 760 PANTHER LIMKAIN B LKAP 646 760 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0371 Mal-Chr1 4251586 4256627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0371 356 625 C2H2 Transcription Factor Family AT5G61190 29.577 1.53e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0371 - - mtr:MTR_7g077430 501.13