Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0346 ATGAATTCGTCATCAAATCCAGATTGTGTCGATAAATGGGTGAACAATGTCCATGAACAAAATGTGCAACATGAGCAAGAAAGTATTGGCAATATTGAACCTCACTTGCAAATGAAGTTTGATTCTGAGGAGGTGGCTTATGATTTTTATAATGCGTACAAATATGCAAATAAAAGTAGACTAGATGGTGTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAGGGTACACAAGGTGTTGACAAAAGATGTCAGTCGACATGGCAGTCTAAAGCAGAAACCAGAACGGGATGTCAAGCACGTATGGTTATTTCACTTGATCGGAAGATAGGAAAATACAAGGTTGTTGACTTTATAACTGAACATAACCACCCTCTTCAACCTCCAGAGTTTGTTCATATGATTCGCTCTCATAGGCGCATATCTGAGGCACAAACATCACAAATTCTCTTAGGAGATGAATGTGGATTAAGACCAAAAGCTTTGCATGAATATATATCCAAGCAAGCTGGTGGAATAGAGGCGGTTGGTTTTACAAAAAAAGACCTTACAAATCACATTGAAATCACACGAAAGGAGTCTGTGAAGTATGGTGAAGTGGGTGCATTGATGATGTATTTCAAAAAAGAAAGTGAAAATCCCTCATTCTTTTATGACTTCCAGATGGATGTTGAAAACCAAATAACAAATATATTTTGGGCGGATGCACAAATGATAAACGATTATGGGTACTTTGGTGACGTCATCACTTTTGACACCACTTACAAGACAAATAAGAATGGTCGGTCGTTGGGTGTATTTGTTGGACTTAGTAATCACATGCAAACAGTCATTTTTGGGGCAACATTGTTATATGATGAAACAATACCTTCTTTTCGGTGGTTATTTGAAACTTTTCTCAAAGCAATGGGTGGAGAAAAGCTTAAAACCATTCTAACCGATCAAGATGCGGCAATGGCTAAGGCTATTTCTTTCGTTATGCCAGAAACATTTCATGGATTATGCACTTGGCATATACGACAGAACGCTCTAAGGCATGTGAACCATTTATATCAAAAAAGTTCACGATTCTGTTTGGATTTTGAAGCTTGCATAGATCTACATGAAGAGGAGGATGAATTTTTGATTGCATGGAATTCTTTACTTGTTGAGCATAATGTTTTGGAAGGTTCGTGGTTGCATACAATTTTTCAATTGAAGGAAAAATGGGCATGGGCTTATGTTCGAAAAACATTCACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGCTTTAATGCTGATTTGAAAAACCATTTGAAGTCTGATTTAAATTTGGTACAATTTTTTACACATTTTAAAAGAGTTTCAAAACATAAGCTTCCTAGATTGAAAATGAAGAAGGCTCGTATGCTTGAATTCCAAGAGGAATATGAAGAATATCAAGACACTTGCATAAAGGATTTGAAAGGAGGTATGTATCTTGTCACAAATTATGATAGTGATAAGGAGAGGATAGTAATGGGAAATCCTACAGAAGCAAAAGTTTCTTGCACTTGTCGTAAATTTGAGACACATGGCATCTTATGCAGTCATGCTTTGAAAGTTTTAGATGTCATGAATATTAAAGATGAACGGTTGGGAAGTAAGCAAGACTTGAATGGGAGGCATGTTGAATTAGACAGAAAAGCTCATTTCATGATGCGATACAATGATTTATGTCCTCGAATGAATAAATTGACAAACAAAGCTTCGGGAACTCATGAAACTTACACTTTTTTGTCAAAAGTTTGTGAAGAGTCCAACAAAATAATTGATGATATGTTGGCCAAAAAGTGTGTGGATGGAGAATCGGGTGGAATGGTTCATGTATCCATATCAATTCAAAAAGGATGCAATTGCCAACGTGGATACTGTTGGCATGGCAAAAGGCGTATCTCAACAAAAGAGAAAGATATCTCAAGAAAATGTAGTGAAATTGTTACCGGTAAGTTTAAATTTATCAATATATTAACTTTTGCTGAACCGAATTCTTTATTTATCTTTTCTTATATTATGCAGCAACAAGTTACAATTCAAGCTACACAATTAAGCCATGTTAACAATGGAACTCCGCATCAAGCTACAAGCCAAGCGGCACAATCGAGCCATGCTAACAATGGAACTCCGCATCAAGCTACAAGCCAAGCAACACAATCAAGCCATGTTAACAATGGAACTCTGCATCAAGCTACAAGCCAAGCAACACAATCAGGCCATGCTGAGACATTGGGATTTTAA 2259 0.3665 MNSSSNPDCVDKWVNNVHEQNVQHEQESIGNIEPHLQMKFDSEEVAYDFYNAYKYANKSRLDGVLTSRRFTCFKEGTQGVDKRCQSTWQSKAETRTGCQARMVISLDRKIGKYKVVDFITEHNHPLQPPEFVHMIRSHRRISEAQTSQILLGDECGLRPKALHEYISKQAGGIEAVGFTKKDLTNHIEITRKESVKYGEVGALMMYFKKESENPSFFYDFQMDVENQITNIFWADAQMINDYGYFGDVITFDTTYKTNKNGRSLGVFVGLSNHMQTVIFGATLLYDETIPSFRWLFETFLKAMGGEKLKTILTDQDAAMAKAISFVMPETFHGLCTWHIRQNALRHVNHLYQKSSRFCLDFEACIDLHEEEDEFLIAWNSLLVEHNVLEGSWLHTIFQLKEKWAWAYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLVQFFTHFKRVSKHKLPRLKMKKARMLEFQEEYEEYQDTCIKDLKGGMYLVTNYDSDKERIVMGNPTEAKVSCTCRKFETHGILCSHALKVLDVMNIKDERLGSKQDLNGRHVELDRKAHFMMRYNDLCPRMNKLTNKASGTHETYTFLSKVCEESNKIIDDMLAKKCVDGESGGMVHVSISIQKGCNCQRGYCWHGKRRISTKEKDISRKCSEIVTGKFKFINILTFAEPNSLFIFSYIMQQQVTIQATQLSHVNNGTPHQATSQAAQSSHANNGTPHQATSQATQSSHVNNGTLHQATSQATQSGHAETLGF* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0346 752 Coils Coil 457 477 - -
Mal1g0346 752 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 17 601 IPR031052 GO:0006355
Mal1g0346 752 Pfam SWIM zinc finger 504 531 IPR007527 GO:0008270
Mal1g0346 752 Pfam FAR1 DNA-binding domain 52 128 IPR004330 -
Mal1g0346 752 SMART 26again6 509 536 IPR006564 GO:0008270
Mal1g0346 752 Pfam MULE transposase domain 248 342 IPR018289 -
Mal1g0346 752 MobiDBLite consensus disorder prediction 694 727 - -
Mal1g0346 752 ProSiteProfiles Zinc finger SWIM-type profile. 487 534 IPR007527 GO:0008270
Mal1g0346 752 PANTHER OS03G0181600 PROTEIN 17 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0346 Mal-Chr1 3896891 3899370 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g0346 MULE 6.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0346 - - cam:101500125 1019.99