Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0336 ATGAAATTGAGTTGCAATGGGTGTCGTGTGCTTCGCAAAGGTTGCAGTGAAGACTGTATCATCAAGCCCTGCCTTGAGTGGATCAGTTCTCCTGAATCTCAAGGCCATGCCACCCTCTTCCTTGCCAAATTTTATGGCCGAACCGGCTTGCTCAACCTCCTCACCAACGCTGCCAATCAAAATCAAAATGCCCCAGCTGTGTTCAGATCATTGTTGTACGAGGCTTCGGGTAGATTGGTGAATCCCACATATGGGGCACTTGGTTTATTTTGGACAGGGGATTGGAGCCGTTGTGAAGCTGCAGTTGAAGCTGTGCTGACTGGATCAAATATTAATGATAATTTTACAGCTGTTGTTGATGGACAAGCATCATCAAGTACACTCATTGCTGAAAATCATGTTCTTCCCAAAACCTATGATATACGCCACGTGGCAAGAGGTACCAGCGTGGACATCAAAGGGAAAACTCAATTTAAAAGAGTTGGTCAAGTTTTCAGGCCCAGGCCACGGGTTGGTTCGGTTGATTCGGCTACAATGCTGAAATCCCTTTTGGAGAGTACCAACATGGAAAATGTGGAGGCTTCATCACTGAATGAAGCTGAGAATCAAGTGAATTTGGAACTTACTCTTGGCTTTGATTGCCAATCAACTAATGGCAAGAAAATATTAGATGATTGA 678 0.4454 MKLSCNGCRVLRKGCSEDCIIKPCLEWISSPESQGHATLFLAKFYGRTGLLNLLTNAANQNQNAPAVFRSLLYEASGRLVNPTYGALGLFWTGDWSRCEAAVEAVLTGSNINDNFTAVVDGQASSSTLIAENHVLPKTYDIRHVARGTSVDIKGKTQFKRVGQVFRPRPRVGSVDSATMLKSLLESTNMENVEASSLNEAENQVNLELTLGFDCQSTNGKKILDD* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0336 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 223 - -
Mal1g0336 225 PANTHER LOB DOMAIN PROTEIN 1 223 - -
Mal1g0336 225 Pfam Lateral organ boundaries (LOB) domain 4 106 IPR004883 -
Mal1g0336 225 ProSiteProfiles LOB domain profile. 3 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0336 Mal-Chr1 3715565 3716749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0336 1 219 AS2 family AT3G02550 44.541 1.92e-56 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal1g0336 LOB 1.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0336 - - mtr:MTR_1g110840 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0336 1 3715565 3716749 Mal1g0336 1 3715565 3716749 ECH
Mal1g0336 1 3715565 3716749 Mal6g4316 6 123867587 123869005 ECH