Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0317 ATGGCCACCGATGGCCACGATTCTCGACGCAAGCATCGCCGATCTTCTTCTCCTGATGACCACGACAAATCCTCAAAACGTCACAAGCACCGCCACCACCATCATCGCCACCGCCATCACGGGAACAAAAAACGCGATGAAGAAGAGATTCAATTTGATGCCGAAACTGTTGCTTCGGTGAAAGATTCTCCGATCAATCATCTCCCTGTTGATGACGTCGAGGAGGGAGAGATTCTCGATGACGAACCTGGCGAAATTGAGGTGAAAGATGATCGAGATCTTCGATCTGATAACAAAAATCCGGGAATTCTCGCTAAAAGTTCAAAAACTGAATGCGAGGGCATCAGCAATGATAGATTTATTAGTCCTACTTCTGACGAAGATGGGAAATGGCGTCAGAGGCACAATGGTACTCGAATTCATGAAGGTGATGATTCTCCAAACCGCTCAAGAGCTGAAACTCAAGCTGGGAGTGATGCTCGGGGCAATGGGTATTTGGATGTTAAGTCTTCCAAAGGGGATAAGTGGCAGAATGGGGAGTTTGGACATTTTAGAGGAAATGAGAAACCAAAAGGTGACTATGATGATGACACACTGGAGGTTAATAGAAGGGAAGTAAATTCCCGCAGGAATTCCTCTGAAAGTGGAGAAGAAAAACACAGATTGTCAGGGACTTCTCCTTTGCACGACGAATACAGAAGTCGATCAAGATCAATTGGTCATACAAGGGACAGGTCTCGTTCTCGTAGTGTAGTAGAAGAGCATGCTCGTCCCAAGAGCAGGCACTCTGTGGAACGAGGATCCCTTTATTATACCAGTAGACACAAGATTGGCTACGAAGTTGATGAGGAAAGAGTGAGGGCATGCAGAAGGGAGCATCGTCACGGCAGTAAGGATCTGATGGAAGATGATAGACGGGAACACAGTGCCAGGTATCACAGTCGGGAGACCCGGGATAAGGATAGGAGTAAGGACCAAGATGTGGATAGAGACTTGCATAGGGAAAAGAAGCGAGAGGAAACAAGCAGGAATAAGGAAGTTGATTGGGTGCGTAGAAGGGAAAAAGAACGTGGAAGGAGCCATGACAGGCATAGAAGGGATGTGGAAAAAGATAGGAGCAGGGAAAGGGATGAGGGTAGGGATAGGAGAAGAGAAAAGGAAAGAGATAGGAGCAGGGACACAGTTTATGAGAGGGATAGGAGAAGGGAAATGGAAAGAGGTATGAGCAGGGACAGAGCAAGGGGTGGTGAGAGAGATAGAGACTGGAAGAGTGAATGGGATTATAGGAACCGGGAAAGGGATACCAATAAGGAGAGGGAGAGACGAGATGACAGATATTGGCACAATGATAAAGATGCTCCTAATGGTAAGGATAAGCATATGCGTCGCGAGGATGATAATGACAGCGGAGATAGATATAAAAAACATTCAAGACATGAAGAAAATGGATACCATGCAGATAGGAAGAGAAATTATACCATGGAAGAGGATGAAAGGAAACTAAAAGGCAGCGAGGTTGAACAAGATAATTTAGATGAGGATCCATTGAAATCACCTGAGCAAGAAGAGGAAGATCTTCTGAACAAAATCAAAGAGGAAAGTAGAAGAAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGGATCAGCAAATAGAACAAGCAGCCAAAAATGAAGGAAAAGACAAGGACGTGGAGATTCACACTGACATTTCTAAAGCAATTGATTGTAAGAGTGATGATGTGAATGATGTGGAACCATCATTTTCTGTTGGGAAATCTCCACCCGAGAATATAAATGTTGGCTCAGAGAAGGTACCTGGTGCTGGTGGTCTAGGCGAGGGTACTCCAAAGAGTGAGAGGTCAGCTGACAAGTATTGTGATGATATATTTGGCGAGACACCAACTGGAGTTCGGAAATCGGGAAAAGGAGATGGATTACCGGTTGAAAGGGTTGGCCTGCATGACAATTGGGATGATGCAGAGGGCTATTACAGCTATCGTTTTGGTGAAATACTTGATGGCCGATATGAAGTTACTGCTGCACACGGGAAGGGTGTCTTTTCAACAGTTGTACGAGCTAAGAATCTAAAAGCTGGTAATGGTGAGCCAGATGAAGTAGCAATAAAAATTATTCGTAATAACGACACCATGTACAAAGCTGGTTTGGATGAGTTGGTCGTTTTGAAGAAATTAGTTGGTGCAGATCCGGATGATAAACGTCATTGTGTTCGTTTCCTTTCAAGCTTTAAGTACAGAAATCATCTATGTTTAGTTTTTGAATCTCTAAATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACTGCTGTGAGGACATATGCAAAACAGCTTTTTATTGCATTGAAGCATCTCCGTAACTGTGGTGTTCTGCATTGTGATATAAAGCCCGATAATATGTTGGTGAATGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTAACACCATATCTCGTGAGTCGCTTTTATCGTGCCCCTGAAATAATTCTTGGCTTGCAATATGATCATCCATTGGATATTTGGTCTGTAGGCTGTTGTTTGTATGAACTGTATACCGGGAAGGTTCTTTTTCCAGGGGTCACAAACAATGACATGCTGCGGCTTCACATGGAATTGAAGGGCCCTTTTCCAAAAAAGATGCTCCGTAAGGGAGCATTTACTGGACAACATTATGACCAGGACTTGAGTTTTCATGCCACTGAAGAGGATCCTGTAACAAAAAAGACCATAAAGCGGGTGATTCTTAACATAAAGCCAAAAGATATTGGAACAATCATCATTGGCTCTCCTGGGGAGGACCCAAAAATGTTGGCCAATTTTAAAGATCTTCTAGATAAAATTTTCGTCTTGGATCCGGACAAGAGGTTGACAGTCTCACAAGCATTGAACCACCCATTCATCACTGGCAAGTGA 2988 0.4347 MATDGHDSRRKHRRSSSPDDHDKSSKRHKHRHHHHRHRHHGNKKRDEEEIQFDAETVASVKDSPINHLPVDDVEEGEILDDEPGEIEVKDDRDLRSDNKNPGILAKSSKTECEGISNDRFISPTSDEDGKWRQRHNGTRIHEGDDSPNRSRAETQAGSDARGNGYLDVKSSKGDKWQNGEFGHFRGNEKPKGDYDDDTLEVNRREVNSRRNSSESGEEKHRLSGTSPLHDEYRSRSRSIGHTRDRSRSRSVVEEHARPKSRHSVERGSLYYTSRHKIGYEVDEERVRACRREHRHGSKDLMEDDRREHSARYHSRETRDKDRSKDQDVDRDLHREKKREETSRNKEVDWVRRREKERGRSHDRHRRDVEKDRSRERDEGRDRRREKERDRSRDTVYERDRRREMERGMSRDRARGGERDRDWKSEWDYRNRERDTNKERERRDDRYWHNDKDAPNGKDKHMRREDDNDSGDRYKKHSRHEENGYHADRKRNYTMEEDERKLKGSEVEQDNLDEDPLKSPEQEEEDLLNKIKEESRRRREAIMEKYKKQDQQIEQAAKNEGKDKDVEIHTDISKAIDCKSDDVNDVEPSFSVGKSPPENINVGSEKVPGAGGLGEGTPKSERSADKYCDDIFGETPTGVRKSGKGDGLPVERVGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGKGVFSTVVRAKNLKAGNGEPDEVAIKIIRNNDTMYKAGLDELVVLKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRTYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLQYDHPLDIWSVGCCLYELYTGKVLFPGVTNNDMLRLHMELKGPFPKKMLRKGAFTGQHYDQDLSFHATEEDPVTKKTIKRVILNIKPKDIGTIIIGSPGEDPKMLANFKDLLDKIFVLDPDKRLTVSQALNHPFITGK* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0317 995 MobiDBLite consensus disorder prediction 1 564 - -
Mal1g0317 995 MobiDBLite consensus disorder prediction 586 623 - -
Mal1g0317 995 ProSiteProfiles Protein kinase domain profile. 677 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0317 995 SUPERFAMILY Protein kinase-like (PK-like) 664 994 IPR011009 -
Mal1g0317 995 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 354 995 - -
Mal1g0317 995 MobiDBLite consensus disorder prediction 123 149 - -
Mal1g0317 995 CDD STKc_PRP4 676 992 IPR044092 GO:0004674|GO:0006468|GO:0045292
Mal1g0317 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Mal1g0317 995 MobiDBLite consensus disorder prediction 276 564 - -
Mal1g0317 995 Pfam Protein kinase domain 679 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0317 995 Gene3D Transferase(Phosphotransferase) domain 1 737 993 - -
Mal1g0317 995 MobiDBLite consensus disorder prediction 101 122 - -
Mal1g0317 995 PANTHER DUAL SPECIFICITY PROTEIN KINASE 354 995 - -
Mal1g0317 995 SMART serkin_6 677 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0317 995 MobiDBLite consensus disorder prediction 25 41 - -
Mal1g0317 995 Gene3D Phosphorylase Kinase; domain 1 648 736 - -
Mal1g0317 995 MobiDBLite consensus disorder prediction 173 264 - -
Mal1g0317 995 MobiDBLite consensus disorder prediction 1 24 - -
Mal1g0317 995 Coils Coil 494 514 - -
Mal1g0317 995 Coils Coil 523 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0317 Mal-Chr1 3479908 3486282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0317 684 989 Core Cell Cycle Gene Families AT1G66750 30.284 3.93e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Mal1g0317 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0317 K08827 - gmx:100776908 1323.92