Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0309 ATGAACATCCCCCAATCGGCAGCCATTCATAAGGCAGTACAAGTACAAACCGCGTTTCAAGATAACAGGGGAAATTACAATGAGCTTTTAAAAGTCTTAAAAGATTTCAAGGATCAAAGAATTTATACAAGAGGTGCCACTGCAAGAGTCAAGGATACTCATTTAATATTGGGATTCAATATGTTCCTGCCAAAGGAACATCAAATCACACTTCCTTTTCAACTTGAGACCACAGGTAAAAAGGTGAAGAAGATAGAAGAGAACCGTGAACTTCCTTGGGATGTGCTTGATATCATTTCCCAAACACTAGATTTTGACGACCTTTTTCAGTTTTCCGGTGTGTGCAAGAATTTGAGGGCTTTTCATAAAATTTACTGGAGAAATTTCTTGGCATCCCAAGAACCATTAATTCTTCAAATTTCTTATCATTGTACTAGATCAATTTCCTTTATTAGCGTACCCGACCAAAAGGTTTATTATTGCTTGAAGATAAAGAAGTACTTCATGGAATATACCTATGCTACATCTTCTAGCGGATATTTTATCATGGTGGGCAGAAATAATTCAGTTTTGCTAATCAATCCATTTACAAGAATAAAGAAGGTAATCAGTACCTGCCCCTTTGATGCTAAGTCTCATCTTTCTCCTAACCGTGCCGTCCTTGCTTTTGGCAAATGCTCTGAAGAATTTTTCTTGGTGGTTTTTTGCAACTATCTTGGGAGTTTGCATGTCTATCAATCTCGAAATTGTGGTTGGGTTACTTATTCGACAATTAGAAATGAAGGGAGGGTTGTTGACTTTGTGGTTTTGCATAATTTAATATATGTTGTCACTACCAAGGCCAACTTAGGGGTACTGAGCTTGAATTCTGCAAATATTAAATTTCTAAAACTGAAGAATACTCCCAATGAAACATTTTCCTTATCCCTTAGGTTGGTTAATTGTGATGAGCAACTTTTAGTGGTTGATTTAAGGTTCGATGAAGTAAGAAATGTGTACAAGATAGACTTCTCAACCATGAATTATGTCAAACTGGAAACTTTGGGCGACATTGCATTATTTTATGCTTGGAATAGAAATTTTTATGCATTGAGCAACCCGGATAAGTGGGGATATGAGAGCAACCATGTGTATGCATTGAGCGATCCTTTATGTTGTGTTTATTCAGGGGATGATAAAAAATTGAAAAAGTTGATTACGCTTCCAGCTCCTCATGGAGCGAATTCCTTCATGTTGGATTGGTGTTTTAGACATCTACAATATGAGGTAGATCATTCTCTAGTCGAGTGA 1290 0.3682 MNIPQSAAIHKAVQVQTAFQDNRGNYNELLKVLKDFKDQRIYTRGATARVKDTHLILGFNMFLPKEHQITLPFQLETTGKKVKKIEENRELPWDVLDIISQTLDFDDLFQFSGVCKNLRAFHKIYWRNFLASQEPLILQISYHCTRSISFISVPDQKVYYCLKIKKYFMEYTYATSSSGYFIMVGRNNSVLLINPFTRIKKVISTCPFDAKSHLSPNRAVLAFGKCSEEFFLVVFCNYLGSLHVYQSRNCGWVTYSTIRNEGRVVDFVVLHNLIYVVTTKANLGVLSLNSANIKFLKLKNTPNETFSLSLRLVNCDEQLLVVDLRFDEVRNVYKIDFSTMNYVKLETLGDIALFYAWNRNFYALSNPDKWGYESNHVYALSDPLCCVYSGDDKKLKKLITLPAPHGANSFMLDWCFRHLQYEVDHSLVE* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0309 429 SUPERFAMILY PAH2 domain 14 65 IPR036600 GO:0006355
Mal1g0309 429 ProSiteProfiles F-box domain profile. 85 129 IPR001810 GO:0005515
Mal1g0309 429 SUPERFAMILY F-box domain 90 160 IPR036047 GO:0005515
Mal1g0309 429 SUPERFAMILY Tricorn protease domain 2 173 417 - -
Mal1g0309 429 Gene3D Paired amphipathic helix 8 64 IPR036600 GO:0006355
Mal1g0309 429 Pfam F-box domain 90 119 IPR001810 GO:0005515
Mal1g0309 429 PANTHER OS06G0113600 PROTEIN 81 424 - -
Mal1g0309 429 PANTHER OS06G0113600 PROTEIN 81 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0309 Mal-Chr1 3408386 3412540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0309 15 71 WRKY Transcription Factor Family AT4G12020 43.548 4.92e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0309 - - cam:101488742 503.827