Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0277 ATGGGATCTGAAGCTATGGTTCCGGAATGGGCATCGGAGGCTTGCATAATGGGAATCGATGAAGCTGGAAGAGGTCCTGTTCTTGGTCCTATGGTTTATGGTTGTTTGTACTGTCCTCGCTCCTACCAAAAAACCCTTGCTACTTTGAGTTTTGCAGATTCTAAGACACTGAAAGAAGAGAAGAGGGAAGAATTATTTGAAACTTTAAAATCCAATGATTCTATTGGATGGGCTGTTGATGTCATTGACCCAAAGGAACTCTCTGCGAAAATGCTCAAGAAGAATAAGATAAACTTGAATGAGATATCACATGACTCTGCCATGGGCCTCGTGGATAGGGTGCTCAAAATGGGAGTGCTTCTAACTGAGGTTTATATTGATACAGTTGGAGATCCAGGGAAATATGAAGCGAAACTGTCTAAAAATTTTCCATCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTTTATCCTGTTGTCAGTGGTGCAAGTATAGTTGCAAAGGTCACAAGAGATCGAGCTGTAAGAGATTGGGTGCTTGATGAGACTGCTGATAACATTCACAGGAACTTTGGCTCTGGATATCCTGGAGATCCCGCAACCAAGTCTTGGCTAGAAGATCACAAACATTCTATCTTTGGTTTTCCAACATTGGTCAGGTTTAGTTGGGGAACTTGCAGCTCTTATTTTAAAGGTGGCGCTGAAGTATTATGGGAGTCTGACTTGGATGAAGACGGTGGCAGCAGTAATAATAATGGCAAGAGGCAATTGAAATTAAACAATCTGGGTTTCACCTCTTCCAAGAGGAGAAGTGAAGAAATAGAATCAAGTGGTAAAGGGCGTTCTAGGTTTTTTCAGGCTCGGAAGCTTGAGCACCTCACTCATTTCTAA 894 0.4195 MGSEAMVPEWASEACIMGIDEAGRGPVLGPMVYGCLYCPRSYQKTLATLSFADSKTLKEEKREELFETLKSNDSIGWAVDVIDPKELSAKMLKKNKINLNEISHDSAMGLVDRVLKMGVLLTEVYIDTVGDPGKYEAKLSKNFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRDWVLDETADNIHRNFGSGYPGDPATKSWLEDHKHSIFGFPTLVRFSWGTCSSYFKGGAEVLWESDLDEDGGSSNNNGKRQLKLNNLGFTSSKRRSEEIESSGKGRSRFFQARKLEHLTHF* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0277 297 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Mal1g0277 297 SUPERFAMILY Ribonuclease H-like 15 231 IPR012337 -
Mal1g0277 297 Gene3D - 2 186 IPR036397 GO:0003676
Mal1g0277 297 Gene3D Ribonuclease hii. Domain 2 187 236 IPR023160 GO:0004523
Mal1g0277 297 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Mal1g0277 297 PANTHER RIBONUCLEASE 4 296 - -
Mal1g0277 297 PANTHER RIBONUCLEASE H2 SUBUNIT A 4 296 IPR001352 GO:0003723|GO:0004523
Mal1g0277 297 CDD RNase_HII_eukaryota_like 17 236 - -
Mal1g0277 297 TIGRFAM TIGR00729: ribonuclease HII 16 229 IPR004649 GO:0004523|GO:0016070
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0277 1 297 Core DNA Replication Machinery Family AT2G25100 65.993 5.22e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0277 K10743 - gmx:100779875 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0277 1 3027763 3030916 Mal1g0277 1 3027763 3030916 ECH