Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0267 ATGCGATCACTTGCTTCTTGGTTGGTTGTTCAGAATCAAGTGAATTTCAACCAGAAGAAAATAAAGTCTCCACGGAGAAAAATCCGAAAGGGAAGCTCAAAACGCCTGCACAGCTTAAGGGCTTGGAGAAATTTTATACTGCACAAATATCCGACAGAGGAATTGAAATTAGTAATTGCTGAGGAGTATGAGTTGACAGAAAAGCAAGTATCTAGATGGTTTTGCCACCGAAGGTTAAAAGATAAAAGATTGTTGAAAGAAGAAGCAAATGCTAATGGACGACAAGATCGTTCAAGTGATGTCATCCAGGATCGTGGCAGTGGACTTGGGCAGGATTCATGTGGAAGCAGTAAGCATGGTGATTATAAGTATCTTGATCCTAAAGAGGTTGAGAGCAATGGCCTCTACAATCGTGATTTGTCTGTTGCAGATGTGACGTATGGACGCAGAAATCATTTTTCTGAAAATGTCAGTGGAATGGATGACACCTCATCTGAGAGTAGCTCTTACTTGCAAGAACGGTTGTATCCTCAAGGCCACGATCCATATGAGATTGAGCCTTCTAGATATAGTAATGCTCTTCCACCCTTAAATCCGAAAGGTGCAATCAACATAGGATATAAACCATCAGGATATTTGAAAGTGAAGGGTGAGATAGAAGATGCTGCTATAACTGTTGTTAAGAAGCAATTAGGAAGGAATTATCAGGAAGATGGTCCACTACTTGGTGTAGAATTTGATCCACTTCCTCCAAGGGCATTTGAATGCCAAACTGAAGATCCAGTTCACGAGGTGCTTTTCAAGAATTTGGACGGATGTGTTCTTAGTATTAATACTACCAAGGTCAACGACAATTAA 858 0.4044 MRSLASWLVVQNQVNFNQKKIKSPRRKIRKGSSKRLHSLRAWRNFILHKYPTEELKLVIAEEYELTEKQVSRWFCHRRLKDKRLLKEEANANGRQDRSSDVIQDRGSGLGQDSCGSSKHGDYKYLDPKEVESNGLYNRDLSVADVTYGRRNHFSENVSGMDDTSSESSSYLQERLYPQGHDPYEIEPSRYSNALPPLNPKGAINIGYKPSGYLKVKGEIEDAAITVVKKQLGRNYQEDGPLLGVEFDPLPPRAFECQTEDPVHEVLFKNLDGCVLSINTTKVNDN* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0267 285 ProSiteProfiles 'Homeobox' domain profile. 22 84 IPR001356 GO:0003677
Mal1g0267 285 Pfam Homeodomain 44 83 IPR001356 GO:0003677
Mal1g0267 285 MobiDBLite consensus disorder prediction 89 122 - -
Mal1g0267 285 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 48 265 - -
Mal1g0267 285 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 48 265 - -
Mal1g0267 285 Gene3D - 5 82 - -
Mal1g0267 285 SMART HOX_1 24 88 IPR001356 GO:0003677
Mal1g0267 285 CDD homeodomain 25 83 IPR001356 GO:0003677
Mal1g0267 285 SUPERFAMILY Homeodomain-like 25 91 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0267 Mal-Chr1 2921687 2922933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0267 15 267 Homeobox Transcription Factor Family AT4G03250 51.562 3.79e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mal1g0267 Homeodomain 5.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0267 - - gmx:100803515 350.132