Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0240 ATGTCTCCTATGTTTACTCCAATTTCTGCTATAGTTGCAGGAAAAACGAATTTAAGTTTGAAGGTTCGCGTAATTCATATGTGGAATGTAACTTCGAGAAAAAACCCTTCCGAAGTTACCTGTATGAATATGTTGTTTGTTGATGAAAAGTCTGATAGGATTCATGCTACTGTGAGAAAGCATTTGGTGCCAAAGATAAAAGATATGGTTGAAGAAGGATCAACATATGTGGTTGATAATATATTAGTTGCTGGAAATGATACTAAGTACAAGATCACGCCACATAAGTACAAGCTCAATTGCATGTTTTCTACGAACTTTATCAAAATCAAAGATAATCATATTCCAATCAACCATTTTGATTTTGTGACATTCAATGAAATTTTAAATTCAACAGATGAGGAAAGGATAATTGATGTTATTGGCCATGTCATTGAAAAGGATGATATTAGAGAGTCTCTAAAGGATGATAAAAATACAAAGAAGATGGACCTTACATTAGAGGATTTAGAAGGACATAGGATTCTTTGTACTCTTTGGGATGATTTCGCTGAACAAATGAAGAGGTTTTTTGACAAACATGATTCAAAAAACCCTGTAATCATGATACTCCAGTTGTGCAAAATAAAGAGATATCTTGGTGCAATGGGTATATCCAATTCATGGTATGGAACAAAATTAATGCTCAATGGCGATCTAGACGTTGTCCAAGATTATATGAATAAGTATTTTTTTTTGTACCACGACTTTTAG 753 0.3307 MSPMFTPISAIVAGKTNLSLKVRVIHMWNVTSRKNPSEVTCMNMLFVDEKSDRIHATVRKHLVPKIKDMVEEGSTYVVDNILVAGNDTKYKITPHKYKLNCMFSTNFIKIKDNHIPINHFDFVTFNEILNSTDEERIIDVIGHVIEKDDIRESLKDDKNTKKMDLTLEDLEGHRILCTLWDDFAEQMKRFFDKHDSKNPVIMILQLCKIKRYLGAMGISNSWYGTKLMLNGDLDVVQDYMNKYFFLYHDF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0240 250 CDD RPA1_DBD_A_like 19 105 - -
Mal1g0240 250 SUPERFAMILY Nucleic acid-binding proteins 5 112 IPR012340 -
Mal1g0240 250 Pfam Domain of unknown function DUF223 44 132 IPR003871 -
Mal1g0240 250 CDD RPA1_DBD_B_like 139 240 - -
Mal1g0240 250 PANTHER REPLICATION FACTOR A 1, RFA1 5 203 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal1g0240 250 Gene3D - 114 244 IPR012340 -
Mal1g0240 250 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-LIKE 5 203 - -
Mal1g0240 250 SUPERFAMILY Nucleic acid-binding proteins 119 241 IPR012340 -
Mal1g0240 250 Gene3D - 4 113 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0240 Mal-Chr1 2643125 2644257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0240 7 214 Core DNA Replication Machinery Family AT5G08020 24.186 9.71e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0240 - - mtr:MTR_1g105785 268.085