Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0231 ATGAACAATTTCATCATGCAAAACTTTACTGAGAGATTAAGACCTCTTGTTGGTTTGAATGGCTGGGATTACTGTGTCTACTGGAAATTAAGTGAAGATCAAAGGTATCTTGAGTGGTTGGGATGTTGTTGTGGTGGGAGTGAAAGCAACCAAAATGGTGGAGAAGAACATCTTTTCCCTGTCTCTTCATGTAGGGATACAATGTTTTCACACCCAAGAACAAACTCTTGTGATCTTCTTTCTCAACTTTCCACTTCCATACCTACAGATTCAGGGATTCATGCACAGACTCTACTAACAAACCAACCCAATTGGTTGAACTATCCCAATAGCTTGGATCCAAACACTTTACAAGAAACCATTAATGGGACCCATGTTTTGATTCCAGTGCCCGGTGGACTAGTTGAGCTCTTTGTAACTAAACAGGTTGGTGAAGATCAACAGGTAATAGATTTTATCACATCTCAATGCATTGTCATGGTGGATCAAGAAGGGATGAACCACTCAATTGGCTTCAATTCAATAAACAACATGCAATCAAATCCAATTCTAGGTGATGAAAATGATGGAAATAAAACAAACAATCTTTTCCATCCATCAGAGACATTGAATCTTCCACATGACATCTCTGTAATGAACTTCATGCAACAGTTCAATTACAATTACAATCAGCAACAAAACAGAATCAAAAACGACGAAACCTTCTCCGAAGAATATCAAGGTTCATTCCTTCATGATCATGAAACCAACAACACTCTCAAATCCAACACAGAAGAGGAGCATGATAACAAAAGCTTGATGACAGATAATAATCAATATATGTTTGTGGATCCATTATTAGACTCAAAAAAGAAGCAAGAACATGTTGTTGGTAGATCAGATTCAATGTCAGATTGCAGTGATCAGAATGAAGAAGAGGATGATGGAAAATATAGGAGAAGGAGTGGAAAAGGAAACCAATCAAAGAACCTTGTTGCAGAGAGAAAAAGAAGGAAGAAACTGAATGATAGGTTATATAACCTTCGTTCATTGGTTCCAAGAATCTCAAAGCTTGATAGAGCATCCATTCTTGGTGATGCTATTGAGTTTGTGAAGGATTTGCAAAAGCAAGTGAAGGAACTTCAAGATGAACTTGAGGAAAATTCAGACACAGGAACTGAAAGTAACTGCATTGTTAATGGAAATAATAATCAATATCTTGGTGGTGTTCAAGTTCAACCAGATAATAATAACAATGTTCCAAAAGCAGAACATGGATTTCATGTTGGAAATGGCTATGTTTCAAAACAAAAGCAGGAAGATGTTGGTCCTGTTACTGACAAACAGACACAGCAGATGGAGCCACAAGTGGAAGTGGCTCAGATAGAAGGGAATGAGTATTTTCTGAAGGTGTTTTGTGAGCACAAGCCTGGTGGATTTGTGAAATTGATGGAAGCTTTGAACACTCTTGGCATGGATGTAGTACATGCCACAGTAACCAGTCACAAGGGTCTTGTCTCAAATGTTTTTAAAGTTGAGAAAAAGGAGAGTGAAATAGTTGAGGCTGAAGATGTTAGAGATTCATTATTAGAGCTGACAAGGAACGGATCGATTGGTTGGAGTCATGAGATGACATCAACGTCAGAGAATGGTGTGATCAATAAGGATCAACATGATCACATCCACAGCCACAATCACCAGAATATTGCTACCTATCATCCACACCAATTTCAATAG 1716 0.3805 MNNFIMQNFTERLRPLVGLNGWDYCVYWKLSEDQRYLEWLGCCCGGSESNQNGGEEHLFPVSSCRDTMFSHPRTNSCDLLSQLSTSIPTDSGIHAQTLLTNQPNWLNYPNSLDPNTLQETINGTHVLIPVPGGLVELFVTKQVGEDQQVIDFITSQCIVMVDQEGMNHSIGFNSINNMQSNPILGDENDGNKTNNLFHPSETLNLPHDISVMNFMQQFNYNYNQQQNRIKNDETFSEEYQGSFLHDHETNNTLKSNTEEEHDNKSLMTDNNQYMFVDPLLDSKKKQEHVVGRSDSMSDCSDQNEEEDDGKYRRRSGKGNQSKNLVAERKRRKKLNDRLYNLRSLVPRISKLDRASILGDAIEFVKDLQKQVKELQDELEENSDTGTESNCIVNGNNNQYLGGVQVQPDNNNNVPKAEHGFHVGNGYVSKQKQEDVGPVTDKQTQQMEPQVEVAQIEGNEYFLKVFCEHKPGGFVKLMEALNTLGMDVVHATVTSHKGLVSNVFKVEKKESEIVEAEDVRDSLLELTRNGSIGWSHEMTSTSENGVINKDQHDHIHSHNHQNIATYHPHQFQ* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0231 571 Gene3D - 307 383 IPR036638 GO:0046983
Mal1g0231 571 CDD bHLH_AtAMS_like 321 391 - -
Mal1g0231 571 MobiDBLite consensus disorder prediction 284 329 - -
Mal1g0231 571 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 367 IPR011598 GO:0046983
Mal1g0231 571 SUPERFAMILY ACT-like 458 528 IPR045865 -
Mal1g0231 571 Coils Coil 357 384 - -
Mal1g0231 571 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 11 155 IPR025610 -
Mal1g0231 571 Coils Coil 505 525 - -
Mal1g0231 571 Pfam Helix-loop-helix DNA-binding domain 325 368 IPR011598 GO:0046983
Mal1g0231 571 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 91 535 - -
Mal1g0231 571 CDD ACT_UUR-ACR-like 462 525 - -
Mal1g0231 571 SMART finulus 324 373 IPR011598 GO:0046983
Mal1g0231 571 ProSiteProfiles ACT domain profile. 461 533 IPR002912 -
Mal1g0231 571 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 321 381 IPR036638 GO:0046983
Mal1g0231 571 PANTHER TRANSCRIPTION FACTOR ABORTED MICROSPORES 91 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0231 Mal-Chr1 2589018 2591707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0231 6 540 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 46.875 1.93e-149 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g0231 bHLH-MYC_N 6.4e-20 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0231 - - aprc:113871920 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0231 1 2589018 2591707 Mal1g0231 1 2589018 2591707 ECH