Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0221 ATGGGGAAGGAAAAAGTTCATATTAACATTGTGTTTATTGGACATGTCGACTCTGGGAAGTCGACCACTGCTGGTCATTTGATCTACAAGCTTGGAGGTATTGAAAAGGATGTCATTGAGAGACTTGAGAAAGAAGCTACTGAGATAAACAGGAGTTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCTGAACGTGAAAGAGGTATCACAATTGACATTTCTATGTCGAAGTTTGAGACAACCAAGTACTACTGCACTCTCATTGATTCCCCTGGACACAGGGATTTCATTAAGAACATGATAACCGGGACGTCCAATGCTGATTGTTCTGTTCTTATCATTGATTCCACAACTGGTGGTTTTGAAGCAAATGATCTGCTGCTGCAACAAAGTATTTATATTTTCATCCCCTTTAAAGTTATGGATGCCACTACACCCAAATTCTCCAAGGATAGGTATGAAGAAATTATGAAGCAAGTTTCACCCTTTTTAATCAAGGTTGGCTATTATAACCTAGATGAAATTCCATTTATTCCCATCTCTGGTTTTGATGGAGATAACATCATTGAGCGCTCTACTAACCTTGACTGGTACAAAGGTCCCACCCTTATTAAAGCTCTTGACCAAATCAAGGAGCCTAAGAGGCCATCACACATGCCTCTCCGATTACCACTTCAGGCTGTCTACAAGATTGGAGAAATTGGAATTGTACCTGTGGGACGTGTTGAGACTGGTGTCTTGAAACCAGGAATGGTGGTGACTTTTGCCCCAACTGGGTTGCAAACTGAAGTGAAGTCTATGGAGATGCACCATGAAGCTCTCATTGAGGCCCTTCCTGGTGACATTGTGGGATTTAATGTTAAGAATGTGTCTCCTAAGGATCTCAGGCGAGGTTATGTTGCCTCAAACTCCAATGATGACCCAGCCATGGAGGCCTTTGCTAAGCTTGTTACCAAGCATGTCAGGCGTTCTTTTGTGGAAATTGAGAAGGAGCCCGAATTCTTGAAGAATGGTGATGCTGGTGTTATTGAGATGATTCCCACCAAGCCCACGGTGGTAGAGGCTTTTTCTAAATATCCTTCACTCAGCCGTTTTACTGTGAGAGACATGCGTCAAACTGTGGCTGTTGGAGTCATCAAGGATGTGATGAAGAAAGAGAAGAAGGATCTGATGCATAATGCAAGAGGTAAGTTCACTAAGTCGGCATTGAAGAAGGACGGAATTGAAGAAGTGAATCTTGCAGGATTATCTATCTAG 1263 0.426 MGKEKVHINIVFIGHVDSGKSTTAGHLIYKLGGIEKDVIERLEKEATEINRSSFKYAWVLDKLKAERERGITIDISMSKFETTKYYCTLIDSPGHRDFIKNMITGTSNADCSVLIIDSTTGGFEANDLLLQQSIYIFIPFKVMDATTPKFSKDRYEEIMKQVSPFLIKVGYYNLDEIPFIPISGFDGDNIIERSTNLDWYKGPTLIKALDQIKEPKRPSHMPLRLPLQAVYKIGEIGIVPVGRVETGVLKPGMVVTFAPTGLQTEVKSMEMHHEALIEALPGDIVGFNVKNVSPKDLRRGYVASNSNDDPAMEAFAKLVTKHVRRSFVEIEKEPEFLKNGDAGVIEMIPTKPTVVEAFSKYPSLSRFTVRDMRQTVAVGVIKDVMKKEKKDLMHNARGKFTKSALKKDGIEEVNLAGLSI* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0221 420 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 315 385 IPR009001 -
Mal1g0221 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 237 IPR027417 -
Mal1g0221 420 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mal1g0221 420 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mal1g0221 420 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Mal1g0221 420 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mal1g0221 420 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 219 IPR000795 GO:0003924|GO:0005525
Mal1g0221 420 CDD EF1_alpha 9 216 - -
Mal1g0221 420 PANTHER TRANSLATION FACTOR 1 314 - -
Mal1g0221 420 PANTHER TRANSLATION FACTOR 315 391 - -
Mal1g0221 420 Gene3D - 1 217 IPR027417 -
Mal1g0221 420 PANTHER ELONGATION FACTOR 1-ALPHA 1 314 - -
Mal1g0221 420 Pfam Elongation factor Tu domain 2 239 302 IPR004161 GO:0005525
Mal1g0221 420 Pfam Elongation factor Tu C-terminal domain 315 384 IPR004160 -
Mal1g0221 420 PANTHER ELONGATION FACTOR 1-ALPHA 315 391 - -
Mal1g0221 420 CDD EF1_alpha_II 222 309 - -
Mal1g0221 420 Gene3D Translation factors 218 302 - -
Mal1g0221 420 Pfam Elongation factor Tu GTP binding domain 6 210 IPR000795 GO:0003924|GO:0005525
Mal1g0221 420 SUPERFAMILY Translation proteins 215 310 IPR009000 -
Mal1g0221 420 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Mal1g0221 420 Gene3D Translation factors 303 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0221 Mal-Chr1 2501814 2503240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0221 1 388 Eukaryotic Initiation Factors Gene Family AT5G60390 68.894 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0221 K03231 - gmx:100801611 582.022