Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0181 ATGGCGGAGGAAGAGAACAACGGCATAGTCACATATACAGTCAAAATCACAGTCACACTCACCGTCCCGGACCCAGATGAATCCGTTCCTGATGATGATCGAGAAACACAACCTACTTTGAATTTTGGCGCCGAAACGGTTCCTTTGGAAGGTGATGACGTGGCACACAATATGGGTGCTGACGCTGAAACGGCGTTGTTGAACGACGGTGAAGGTTCGGTTGATGGCGATGATGATGTGGTAGCAGCAGAAGAAGAATCCGTTCCTGGTAGAGAAAAACAAGCTATGAATGTTGGCGCCAAAACGGACTATGAAGGTTCAGTTGCAGCTAGGGATTCTTCCTCCATTAGAGCTGCTGCGGTGATAATGAAATGCGGCAGAAAGAAAAAGAAACGCGGAAGAAAGAGTTTTGCAGAAATTCAGAAGAGGAAGATGGATGAAGAAGCGTTAAGGAACAGAACAAATGAAGAAAGAGACGTGGCAGCCGGAGGCTCTTCATTGGTTCAACCGGAGAGAAAGAGACGTGGCAGGAAGAGAAAAGCGGAGAAGGAAACCACCGAAAATGAGGTTCCACAAGTCAACAAGAAACTTAAATGCAAGGAAGAGATAGTGCCTAAAATCAGAGAGAGTAATGCTAAGGAAATGAAGTGTAAGGCTGAAACCAACAACGATGAGGAGGTTGAGTTCTCTAAGTATCTGCTGAAAGGACTTCTTCCACATTTAAGACAGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAAGAGACAAGGGCTCTCACTCTCAAAACTAAAAATAAAAGCGGCAAATAATAATAATAAAGATGAGCGTGTGTTCTGTGACAACTGCAAAACATCAATATTTGACTACCACAGAAGCTGTACAGAATGCTCTTTTGACCTTTGTCTCCTCTGTTGCTGTGAGCTTCGTGGTGGGCAGCTTCTAGGTGGTGCAGATCCAATTGCCCTCGAGTATATTTTCCGAGGTCGCGATTATCTACATGGTGGAAATGAAGAAAAACAGGTTGAAGAAAATGAATCACAGACTGAGGACGAGTCTATGACTCGTGAGTGGTCAAGATCTGGGTGGCATGTGAATGGCGATGGTAGCATTCCCTGTCCGAAAGCCGATAATGAATGTGATCATGGTTTCCTTGAACTGAGAAGAATACTTCCTCCAAATTGCATCTCTGAGTTAGTATGTAAAGCAAACAAACTTGCAGAAACAATTAAGCTTCAAGATGTAGAAGAGACTCTTGATAATAGGTGTTCTTGCTTGAAACCTGTTTGGAACGCCGATGATATACACAATAACACAAGGAAGGCAGCTTTTCATGAAGATTCTAGTGACAAATTTTTATACTGTCCTAGGGCTGTAGATCTAAATCATGGAGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGTAATGTACTTGAATGTACATCTGGATTAAGCTGGGAGCCACTAGTGATGTGGCGTGCATTCCGTCAAATAACCAATTCCAAATACGATGTATTTTTGGATGTGAAGGCAGTTAATTGCTTAGATTGGTGTGAGGGAGATATTAATATCCACCAATTCTTTACTGGGTACACAAATGGTCGCAAGGATTGGCTTAATTGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGACTTATTTCAGGAACTTTTACCTCGTCACCATGCTGAGTTCATATCTTCCTTGCCTTATAAAGAATATACAGATCCTTTTAGAGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTGTAAAGCCTGACATGGGGCCAAGAACATATATTGCTTATGGATTTGCTCAGGATCTTGGACGCGGTGATTCCGTGACTAAGCTCCATTGTGATGTGTCTGATGCAGTAAATGTGTTGACTCATGTCGCTAAAGTGGAACTAACACCTGCGGAAATTACTGTCATTAAAAAATTGACACATAAGCACCTTGAGCAAGATAAGAGGGAGCTACATGGTGATGAGAAGGTGGTTGATATATTTCATCTACACTCTGGCACTAATGATGATGACCTGTTGGTTGGAGAGGATTCCCTAGAAGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCCAAATTGAAGGAATATCTAAAGAAGCATTTCAGAGAGTTCAGACATGTCCATTGCAGTCCTTTAAAGCAGGTTATTGACCCCATTCATGATCAGACCATTTATCTGACTATGGAGCATAAGGTGAAACTTAAGGAAGAGTATGGAATTGAGCCTTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTTTCATTCCTGCTGGTTTGCCTCACCAAGTCAAAAATCTGAAGTCATGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAACATATTGGTGAGTGTTTCCGTCTGACAGAGGAACTCCGCAAGCTTCCAATAAATCACAGATTTTCCGAGGACAAGTTTGAGGTGAAGAAAATTGTCATACATGCTATGCTTGATGTGGTTGAAAAATTAGAGAAAGCAAGGTCTGGGAAAACCAAGGTTTGTGCCTAA 2580 0.4233 MAEEENNGIVTYTVKITVTLTVPDPDESVPDDDRETQPTLNFGAETVPLEGDDVAHNMGADAETALLNDGEGSVDGDDDVVAAEEESVPGREKQAMNVGAKTDYEGSVAARDSSSIRAAAVIMKCGRKKKKRGRKSFAEIQKRKMDEEALRNRTNEERDVAAGGSSLVQPERKRRGRKRKAEKETTENEVPQVNKKLKCKEEIVPKIRESNAKEMKCKAETNNDEEVEFSKYLLKGLLPHLRQLDEEQMIEKEREAKRQGLSLSKLKIKAANNNNKDERVFCDNCKTSIFDYHRSCTECSFDLCLLCCCELRGGQLLGGADPIALEYIFRGRDYLHGGNEEKQVEENESQTEDESMTREWSRSGWHVNGDGSIPCPKADNECDHGFLELRRILPPNCISELVCKANKLAETIKLQDVEETLDNRCSCLKPVWNADDIHNNTRKAAFHEDSSDKFLYCPRAVDLNHGDLRHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQITNSKYDVFLDVKAVNCLDWCEGDINIHQFFTGYTNGRKDWLNWPEVLKLKDWPPSDLFQELLPRHHAEFISSLPYKEYTDPFRGSLNLAVKLPDYCVKPDMGPRTYIAYGFAQDLGRGDSVTKLHCDVSDAVNVLTHVAKVELTPAEITVIKKLTHKHLEQDKRELHGDEKVVDIFHLHSGTNDDDLLVGEDSLEGALWDIFRREDVPKLKEYLKKHFREFRHVHCSPLKQVIDPIHDQTIYLTMEHKVKLKEEYGIEPWTFIQKLGDAVFIPAGLPHQVKNLKSCIKVALDFVSPEHIGECFRLTEELRKLPINHRFSEDKFEVKKIVIHAMLDVVEKLEKARSGKTKVCA* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0181 859 MobiDBLite consensus disorder prediction 139 158 - -
Mal1g0181 859 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 116 850 IPR045109 GO:0032454|GO:0033169
Mal1g0181 859 MobiDBLite consensus disorder prediction 339 360 - -
Mal1g0181 859 Gene3D Cupin 453 826 - -
Mal1g0181 859 MobiDBLite consensus disorder prediction 339 365 - -
Mal1g0181 859 Pfam JmjC domain, hydroxylase 700 800 IPR003347 -
Mal1g0181 859 SUPERFAMILY Clavaminate synthase-like 460 842 - -
Mal1g0181 859 SMART cupin_9 569 817 IPR003347 -
Mal1g0181 859 MobiDBLite consensus disorder prediction 125 189 - -
Mal1g0181 859 ProSiteProfiles JmjC domain profile. 588 817 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0181 Mal-Chr1 2036787 2043438 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal1g0181 JmjC 1.5e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0181 K15601 - gmx:100780803 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0181 1 2036787 2043438 Mal1g0181 1 2036787 2043438 ECH