Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0180 ATGGCGGGGGAAGAAGAGAACGACGACCTAGTCACATATACAGTGAAAATCAAAGTCACACTCACCGTCCCGGACACAGACGAACCCATTCCCGATGATGATCGACAAACAGTAGTGCCGCTGGAAGACGATGCGGCAGCAGGAGTCTCTTCTTCCGTTTCGGTTGAAGGTGATGACGTGGAAGCTGGAGGCTCTTCATCTTTTCGACTGGAGAGAAAGAGAAAAACGGAGAAGGAAACCGAAACGGGCGACAAGGAGAACGCCGTGTTTGTGGTGGATAAGGAAGTGAAGAAAAAGATAATCGCTGTTTCTGATGAAAATAATGGTGCACAAGAGGGTGAGGAAAATGCCATGAAAGAGAAGAAGAAACCTGATAGGAAAAGAAAGACAGTTTCTAGTTCTGAAGAAAATGATGAAGCCGTACAAAAGAGTGATGTTTTGACGGAGGGGAATCATGACCGTTCTGAAATTGAAATGCCTTTATCTGATGATACTAGAAAAGTGAAACCTAAGTGGTTTCAAAAGGAGTCCTTAATGTGCCATCAATGTCAGAGAAATGACAAGGGGAGGGTTGTCAGATGCACAAAATGCAAACGGAAAAGATATTGCATACCCTGTTTAAACAAGTGGTATCCTCACTTGAAAGAGGAGAAAATTGCCGAGGCATGTCCAGTGTGCTATGGTAATTGCAATTGCAAAGCTTGCTTGCAATCTAGTGCAGTTATCAATGCAATTAAAATGAGGACTAAAATGAAGACAGAAACCAACAACGACCATGTGGTCGAGCTCTCCGAGTATATGCTGAAAGAACTTCTTCCGTACTTAAGACAATTGGATGAAGAACAAATGGCCGAGAAGGAGATAGAAGCCAAGAGACAAGGGCTCTCACATTCTAAGCTAAAAGTAAAAGTAGCAGATTACCCTAAAAATAAGCGTGTGTACTGTGACAACTGCAAAACGTCAATATTCGACTACCACAGAAGCTGTACAAAATGCTCTTGTAACATTTGTCTCCTTTGTTGCTGTGAGCTTCGTGGTGGGAAGCTTCTAGGTGGTGCAGATCCAATTGAGTTTGAGTTTATCTTCCGAGGGCGTGATTATCTACACGGTGGAAATGAAAAGAGAGTAAAAAAAAATGAAGCTCAATCTGCTGCCCAGCCTGAGATTTGTGAGTGGTCAAGATCCGGGTGGCATGCAGATAGTGATGGTAGCATTCCCTGTCCAAAAGCTGATGATGATTGTGGTCAAGGTTTCCTTGAACTGAGAAGCATACTTCCACCAAATTGCATCTCTGAGTTAGTATGTAAAGCAAAAGAACTCAAGGAAACAATTAAGCTACAAGATGCAGAGGAGACTTTTGATAGTAGGTGTTCTTGTTTGAAGTCTGTTAGGAATGCAGCTGATATACACAATAATACAAGGAAGGCAGCTTCTCGTGAAGATTCCAATGACAACTTCTTATACTCCCCCAGGGCTGTAAATCTATGTCATGAGGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAGTGTACATCTGGTTTAAGCTGGGAACCGCTTGTCATGTGGCGCGCATTCCGTCAGATAAGAAATACCAAGCACAAAACACTTTTGGATGTGAAGGCAATTGATTGCTTAGATTGGTGTGAGGGAGATATCAATGTGCACCAATTCTTTACTGGGTACGCAAAAGGTCGCTCGGATTGGCTTAATTGGCCTCAGGTTTTGAAATTGAAAGATTGGCCTCCTTCTAACTTATTCGAGGAAAGTTTGCCTCGTCATTGTGCTGAGTTCATATCTTCCTTGCCGTATAAAGAATATACAGATCCTTTCAAAGGAGTTCTTAACCTTGCTGTGAAGTTGCCCAAAGATGATCTAAAGCCAGACATGGGCCCAAAAGCATATATTGCTTATGGATTTGATCAGGAGCTTGGGCGGGGTGATTCTGTGACTAAGCTCCATTGTAATATGTCTGATGCAGTAAATGTGCTGACTCATATTGCTGAAGTGAAATTGAAATCTGAGGGCATTACTGCCATTAAGAAACTAACGCAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATAATCGAGATGGAGGGACCAACGTTGGCATGCTTGATAATTCATCTTCTTCCATGAATGCTTCAGACGAGCGAAATAGCGTTGGAGTCGTGGAAAATAGGGGCGATTCTTTAGACGGTGCTGTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGGAGGAATATTTAAAGAAGCATTTCAAAGAGTTCAGGCATGTCCATTGCTCTCCTTTAAAGCAGGTTATTCACCCCATCCATGACCAGACCTTTTATCTGACTCGAGAGCATAAGAGGAAACTTAAGGAGGAGTATGGTATTGAGCCTTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTTTCATTCCTGCCGGCTGTCCTCACCAAGTCAGAAATATAAAGTCATGCATCAAGATCGGACTTGATTTTGTCTCACCTGAAAATGTTGGTGAGTGCTTCCGTTTGACTGAGGAATTCCGTAAGCTTCCGATAGACCACATGTCCACCAAGGACAAGTTAGAGGTGAAGAAAATGACTATATATGCTATGCTTGATGTGGTCAAAAAATTGAAGAAAACAAGGTCTGGGGAAACCAAGGATCCAGTGTAA 2712 0.4266 MAGEEENDDLVTYTVKIKVTLTVPDTDEPIPDDDRQTVVPLEDDAAAGVSSSVSVEGDDVEAGGSSSFRLERKRKTEKETETGDKENAVFVVDKEVKKKIIAVSDENNGAQEGEENAMKEKKKPDRKRKTVSSSEENDEAVQKSDVLTEGNHDRSEIEMPLSDDTRKVKPKWFQKESLMCHQCQRNDKGRVVRCTKCKRKRYCIPCLNKWYPHLKEEKIAEACPVCYGNCNCKACLQSSAVINAIKMRTKMKTETNNDHVVELSEYMLKELLPYLRQLDEEQMAEKEIEAKRQGLSHSKLKVKVADYPKNKRVYCDNCKTSIFDYHRSCTKCSCNICLLCCCELRGGKLLGGADPIEFEFIFRGRDYLHGGNEKRVKKNEAQSAAQPEICEWSRSGWHADSDGSIPCPKADDDCGQGFLELRSILPPNCISELVCKAKELKETIKLQDAEETFDSRCSCLKSVRNAADIHNNTRKAASREDSNDNFLYSPRAVNLCHEDLRHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQIRNTKHKTLLDVKAIDCLDWCEGDINVHQFFTGYAKGRSDWLNWPQVLKLKDWPPSNLFEESLPRHCAEFISSLPYKEYTDPFKGVLNLAVKLPKDDLKPDMGPKAYIAYGFDQELGRGDSVTKLHCNMSDAVNVLTHIAEVKLKSEGITAIKKLTQKHLEQDKRELHGDNRDGGTNVGMLDNSSSSMNASDERNSVGVVENRGDSLDGAVWDIFRREDVPKLEEYLKKHFKEFRHVHCSPLKQVIHPIHDQTFYLTREHKRKLKEEYGIEPWTFIQKLGDAVFIPAGCPHQVRNIKSCIKIGLDFVSPENVGECFRLTEEFRKLPIDHMSTKDKLEVKKMTIYAMLDVVKKLKKTRSGETKDPV* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0180 903 MobiDBLite consensus disorder prediction 65 89 - -
Mal1g0180 903 ProSiteProfiles JmjC domain profile. 620 861 IPR003347 -
Mal1g0180 903 Coils Coil 430 450 - -
Mal1g0180 903 MobiDBLite consensus disorder prediction 112 163 - -
Mal1g0180 903 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 43 888 IPR045109 GO:0032454|GO:0033169
Mal1g0180 903 PANTHER - 43 888 - -
Mal1g0180 903 SMART cupin_9 601 861 IPR003347 -
Mal1g0180 903 SUPERFAMILY Clavaminate synthase-like 492 879 - -
Mal1g0180 903 Gene3D Cupin 491 870 - -
Mal1g0180 903 MobiDBLite consensus disorder prediction 43 89 - -
Mal1g0180 903 MobiDBLite consensus disorder prediction 107 163 - -
Mal1g0180 903 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 175 251 IPR018866 -
Mal1g0180 903 ProSiteProfiles Zinc finger RING-type profile. 180 226 IPR001841 -
Mal1g0180 903 Pfam JmjC domain, hydroxylase 748 844 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0180 Mal-Chr1 1985202 1999878 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal1g0180 JmjC 1.8e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0180 K15601 - gmx:100780803 1061.6