Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0179 ATGGCGGGTGAAGAAAACAACAACACAGGGGAGGAGCCCATTCCCGAAACGACGCCGTTGAAGGTTGATGACGTGGCACAAACTGCGAATGTTGTCGCCGATACGGCCTCGTTGAAGGACGGTGAAGGACAAGGTCCTGTTAAAGGTGATGACGTGGCAGCAGAAGAAGAATCTGTTCCTGATCGTGAAAAACAAGCTATGAATGTTGACGCTGAAACGGCGTCGTTGAAGGACGATGGAGGTTCGGTTGAAGGTGATGACGTGGCACCCGGAGAATCTTCTTCCGATAAAGTGATAAGAAAGTACGGTAGAAGGAAAAAGAAACCCGGAAGAAAGAGTAATGCAGAAATCGAGAAGAAGAAGATGGAAGAAGCTTCTGGGAACGGAACAAAGGAAGAAACTCGTGAAGGTAATGATGACGTGGCACCCGGAGGCTCAATTTCTGTTGATACCGCCACTCCGGCAAAGAAACGCGGTATAAAGAGGAAAACGGAGAAGAAAGGTGAAACATGCCAAGGTGCTGATGTGGAAGAAGGAGGGTTATCTCCCGTTGGTGTGAGAAAGAGTGTAAGGCCTAGGAAGATTACATCACTGAAGGATTACGTGTCTGATTTGGAGGATGAAGTGAAGAAAAAGGGGAAACGTGGCAGGAAGAAGAAGGTCATAATCGGTGTTTCTGATGAAAATGATGCTGCAGAAAAAGGGGAAAATGTGAAGAAAGAGAGGAGGAAGAAGCCTGGTAGAAAAAGGAAGGAAATTTTTAGTTCTGGAGAAGAATATGAAGCTGAAAACGAGGGGGGAAATGTAAAAAAAGAGAAGAAGAAACCTGGTAGAAAAAAGAAGGTAAGTCATAGTTCTGAAGAAAATGATGAAGCTGATCAAGAGGGGGAAAATGGTAGAAAAATTAAGATTGAGGAGAATGAACTGATCAGTGAAAAGAAGTTAGAGAGTGATGATTTGGAGGAGGAGAATCATGACCGTTCTGAAAATGAAATGGCTTTATCTGATGATAATAAAGGTTATTCTTTAAGGACTACTAGAAAAGTGAAAGCTAAAAGCATTGAACAGCTGAAGCCAAAACCCAACAAATGGAACCCTAAGTGGATTGAAGAGGAGTCCTTAATGTGCCATCAATGTCAGAGAAATGACAAGGGCAGGGTTGTTAGATGCACAAAATGCAAACGGAAAAGATATTGCATACCCTGTTTAAACAATTGGTATCCTCACTTGAAAGAGGAGCAAATTGCTGAGGCATGTCCTGTGTGCTGTGGTAATTGCAATTGCAAAGCATGCTTGCGTTCATGTGCACTTATTGAGGAAATTAAAAACAAGACGGAAACCAACACCGACCATGAGGTTGAGCTGTCCAAGTATATGCTGAAAGTACTTCTTCCGTATTTAATACGATTGGATGAAGAGCAAATGGCTGAGAAGGAGATAGAAGCAAAGAGACAAGGGCTTTCATGTTCTGAGCTAAAAATCAAAGTAGCAGATTGCCCTAAAAACGAGCGTGTATACTGTGACAACTGCAAAACGTCAATATTCGATTACCACAGAAGTTGTACAAAATGTCCTTTTGACATTTGCCTCCGTTGTTGCTGCGAGCTTCGTGGTGGGAAGCTTCTAGGTGGTTCAGAGCCCATTGAGTTTGAGTTTATCTACCGAGGGCGTGATTATCTGCATGCTGGAAATGAAGAGAGAGTTAAAAAAAATGAACGTCGTGCTGCTGCCCAGCCTGAGATTCCTGATTGGTCAAGATCTGGGTGGCATGCAGATAGTGATGGTAGAATTCCCTGTCCAAAAGCTGATGATGATGGTGATCATGGTTTCCTTGAACTGAGAAGCACACTTCCACCAAATTGCATCTCTGAGTTAGTATACAAAGCAAAAGAACTTGAAGGAGCAATTACGCTTCAAGATGCTGAGGAGACTGTTGAAATTAGGTGTTCTTGTTTGAAGCCTGTTAGGAATGAAGATGATATCCACAATAACACAAGGAAGGCAGCTTCTCGTAAAGATTCCAGTGACAATATCTTATACTGTCCAAGTGCTGTAAATCTACACAATGAAGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCGCTTGTCATGTGGCGTGCATTCCGTCAGATAAGCAATACCAAGCACAAAACACTGTTGGATGTGAAGGCTATTGATTGTTTAGATTGGTGTGAGGGAGAAATTAATGTTCGCCAATTCTTTACTGGGTACACAAATGGTCGCCCAGATTGGCTTAATTGGCCTCAGGTTTTGAAATTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTGCCTCGTCATTGTGCCGAGTTCATATCTTCCTTGCCGTATAAAGAATATACAAATCCTTTCAATGGTGTTCTTAACCTTGCAGTGAAGTTACCTGACAGTGTTCTAAAGCCAGACATGGGCCCAAAAACTTATATTGCATATGGATTTGCACAGGAGCTTGGGCGGGGTGATTCTGTGACTAAACTCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAATTGAAATCTGAGGGCATTACTGCCATTAAGAAACTGAAACAAAAGCACCTTGAGCAAGACAAGATGGAGCTACATGGTGATAATCCGGATGGTGAGACCAAGGTTGACATGCTTGATAATTCACCTTCTTCCATAGATGCTTCAGACGAGCAAAATAGCGTAGGTTCTTTAGACGGTGCTCTGTGGGATATTTTTCGGAGGGAGGACATACCTAAGTTGGAGGCATATTTAAAGAAGCATTTCAGAGAGTTCAGGCATGTACATTGCTCTCCTTTAAAGCAGGTTGTTCACCCCATCCATGATCAAACCTTTTATTTGACTATCGAGCATAAGAAGAGGCTTAAGGAAGAGTATGGAATTGAACCTTGGACTTTTATTCAGAGGCTAGGAGATGCTGTTTTTATTCCAGCTGGTTGTCCCCACCAAGTCCGAAATCTGAAGTCATGCACCAAGGTTGCGCTTGATTTTGTCTCCCCTGAAAATGTTGGCGAGTGCTTTCATTTGACAGAGGAATTCCGCAAACTTCCAGTAGGTCACAGGTCCACAGAGGACAAATTGGAGGTGAAGAAAATGATTATATATGCTATGATTGATTTGGTCGAAAAGTTGGAGAATGCAAGGTCTGGAGAAACCAAGGTTCCAGTGTAA 3267 0.4249 MAGEENNNTGEEPIPETTPLKVDDVAQTANVVADTASLKDGEGQGPVKGDDVAAEEESVPDREKQAMNVDAETASLKDDGGSVEGDDVAPGESSSDKVIRKYGRRKKKPGRKSNAEIEKKKMEEASGNGTKEETREGNDDVAPGGSISVDTATPAKKRGIKRKTEKKGETCQGADVEEGGLSPVGVRKSVRPRKITSLKDYVSDLEDEVKKKGKRGRKKKVIIGVSDENDAAEKGENVKKERRKKPGRKRKEIFSSGEEYEAENEGGNVKKEKKKPGRKKKVSHSSEENDEADQEGENGRKIKIEENELISEKKLESDDLEEENHDRSENEMALSDDNKGYSLRTTRKVKAKSIEQLKPKPNKWNPKWIEEESLMCHQCQRNDKGRVVRCTKCKRKRYCIPCLNNWYPHLKEEQIAEACPVCCGNCNCKACLRSCALIEEIKNKTETNTDHEVELSKYMLKVLLPYLIRLDEEQMAEKEIEAKRQGLSCSELKIKVADCPKNERVYCDNCKTSIFDYHRSCTKCPFDICLRCCCELRGGKLLGGSEPIEFEFIYRGRDYLHAGNEERVKKNERRAAAQPEIPDWSRSGWHADSDGRIPCPKADDDGDHGFLELRSTLPPNCISELVYKAKELEGAITLQDAEETVEIRCSCLKPVRNEDDIHNNTRKAASRKDSSDNILYCPSAVNLHNEDLRHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQISNTKHKTLLDVKAIDCLDWCEGEINVRQFFTGYTNGRPDWLNWPQVLKLKDWPPSNLFEESLPRHCAEFISSLPYKEYTNPFNGVLNLAVKLPDSVLKPDMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLKSEGITAIKKLKQKHLEQDKMELHGDNPDGETKVDMLDNSPSSIDASDEQNSVGSLDGALWDIFRREDIPKLEAYLKKHFREFRHVHCSPLKQVVHPIHDQTFYLTIEHKKRLKEEYGIEPWTFIQRLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFHLTEEFRKLPVGHRSTEDKLEVKKMIIYAMIDLVEKLENARSGETKVPV* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0179 1088 Pfam JmjC domain, hydroxylase 929 1029 IPR003347 -
Mal1g0179 1088 SMART cupin_9 793 1046 IPR003347 -
Mal1g0179 1088 Gene3D Cupin 676 1055 - -
Mal1g0179 1088 MobiDBLite consensus disorder prediction 1 340 - -
Mal1g0179 1088 Coils Coil 303 323 - -
Mal1g0179 1088 MobiDBLite consensus disorder prediction 220 240 - -
Mal1g0179 1088 MobiDBLite consensus disorder prediction 281 334 - -
Mal1g0179 1088 MobiDBLite consensus disorder prediction 44 68 - -
Mal1g0179 1088 MobiDBLite consensus disorder prediction 111 139 - -
Mal1g0179 1088 ProSiteProfiles Zinc finger RING-type profile. 376 422 IPR001841 -
Mal1g0179 1088 SUPERFAMILY Clavaminate synthase-like 691 1068 - -
Mal1g0179 1088 MobiDBLite consensus disorder prediction 77 99 - -
Mal1g0179 1088 ProSiteProfiles JmjC domain profile. 812 1046 IPR003347 -
Mal1g0179 1088 MobiDBLite consensus disorder prediction 251 272 - -
Mal1g0179 1088 MobiDBLite consensus disorder prediction 910 926 - -
Mal1g0179 1088 MobiDBLite consensus disorder prediction 896 926 - -
Mal1g0179 1088 MobiDBLite consensus disorder prediction 193 212 - -
Mal1g0179 1088 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 113 1078 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0179 Mal-Chr1 1962515 1975181 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal1g0179 JmjC 8.1e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0179 K15601 - gmx:112997634 1037.33