Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0163 ATGTCTAACCCGGACGGAACAATAACAACCACCACCACGAACGGTTCAATCATTGACCCAAACCGTCAACAATTAGCCGTCAAAAAACCTCCGGCAAAAGACCGTCACAGTAAAGTCGACGGCCGTGGTCGCCGTATTCGTATGCCAATCATATGCGCCGCACGTGTCTTCCAACTCACCCGCGAATTAGGTCACAAATCCGACGGTCAAACCATCGAATGGCTCCTCCGTCAAGCTGAACCCTCCATCATCGCCGCCACCGGTACCGGTACAACTCCGGCGAGTTTCTCTTCTCTCTCCGTTTCACTTCGTGGTTCCAACAACTCCCTCCCTTCCCCTTCCTCCACTTCGCTTGACCACAAACCTCTTCTCTCTCCTACGCCGTTCATTCTAGGTAAACGTATTCGCACTGATGATGATTCTTCTTCTTCCTCTGCCAAAGATGATGCTCTTTCTGTTGGTTCTCTTTCCACACCGGCGGCTCTTTGGGCTTTACCTACACGGCCTGATTTTGGTCAAATTTGGAGTTTTGCTGCTGCTGCTGCCGGAGCTCCTCCGCCGGAAATGATGGTTCAGTCTTTGTCTCAGCAGCAACAACAGGTTCAAGCTAATTTCTTCGCTCATCATCATCAGCAGCAGCAGCAACAACAGCATCAACAAGCTATGGGTGAAGCTTCAGCTGCTAGAGTTGGGAATTATCTTCCTGGTCATCTCAATTTGCTTGCTTCGCTGTCGGGTGGACATGGAAATTCTGGTCGGAGAGATGATGAACATCATTGA 780 0.5026 MSNPDGTITTTTTNGSIIDPNRQQLAVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSVSLRGSNNSLPSPSSTSLDHKPLLSPTPFILGKRIRTDDDSSSSSAKDDALSVGSLSTPAALWALPTRPDFGQIWSFAAAAAGAPPPEMMVQSLSQQQQQVQANFFAHHHQQQQQQQHQQAMGEASAARVGNYLPGHLNLLASLSGGHGNSGRRDDEHH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0163 259 Pfam TCP family transcription factor 32 219 IPR017887 -
Mal1g0163 259 MobiDBLite consensus disorder prediction 102 123 - -
Mal1g0163 259 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 256 - -
Mal1g0163 259 MobiDBLite consensus disorder prediction 132 151 - -
Mal1g0163 259 ProSiteProfiles TCP domain profile. 32 86 IPR017887 -
Mal1g0163 259 MobiDBLite consensus disorder prediction 102 122 - -
Mal1g0163 259 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 256 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0163 Mal-Chr1 1785626 1786405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0163 12 257 TCP Transcription Factor Family AT5G23280 65.354 4.03e-97 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal1g0163 TCP 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0163 K16221 - gmx:100799005 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0163 1 1785626 1786405 Mal1g0163 1 1785626 1786405 ECH