Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0158 ATGTCTCACACAACCAGTGTCCCGCCTGCTTTCCAGTCTATTAAGTCGCTCCCACCCGAGTTCAAGTTTGATAATAATCGAAACTCTGGTCTTGCGGAAAAGCACAGAAATATTAAGGGGAGAAGCACTGATCTGATTAGATCAAATGCTCGTGAAAATGGTGCAATTGTAGGAGAGGTTTCTAAGGAAGCTCACAACCGTGCTGGCGGAATGGATCTCTCTGACGAAGAATCTCCATATGGTGGAAATGGTGAGTCATTTGAAGACAGGCAATCATATGCTAATGATGACTCGATATCTGCTTCGTTGCCCCAACCATCAATTTCAACGTCCTCTAGGGAAAGCAGATGGAGTGATACAACTCCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGCTTCAACTTTCTAACGAAGATTGGGAACTCGTGAAGATAATATCAACTTCTGGAACAGAATCTGTCATTTCACTGCCTGACGGGAAAGTTTTAAAGGTGAAAGATGAAAGTTTGGTACCAGCAAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAATGAACCGTCAGTTTTATACAACCTGCAACATAGATACAATCAAAATTTGATCTATACAAAAGCAGGGCCTGTTTTGGTGGCCATAAATCCCTTTAAGAAAGTTCCTCTGTATGGTATTGACTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAGCCCTCATGTCTATGCAATTACAGACTCAGCCATCAGAGAGATGATACGAGTTATATTTGAACTGGGACCTATAATAATTCTTATTCTTATAATCTGCATATATAGCGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAAATAGCAATGCAATACCTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGCATGAAATATTAAAGACTAATCCAATACTAGAAGCCTTTGGCAATGGAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATATCTGGTGCTAATATTCAAACATTTTTGTTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCCGGAGCCCCACCATCTCTCAGGGAGAAGCTAAATCTACGAAGTGCGGAAGACTATAAATATCTGAGACAGAGCAATTGTTATTCAATTAATGGTGTTGATGATGCAGAAGAATTTCGCATAGTCACGGATGCTTTGGATGTTGTCCACATTAGCAAAGGAGACCAAGAAAATGTATTTGCAATGCTTGCTGCAGTGTTATGGTTGGGAAACATATCATTTACTGTGATCGATAATGAAAATCATGTTCAAGCTGTTGAGGATGAAGGGCTGTTCAGCACTGCCAAGTTGATTGGCTGTGACATTGAAGATCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGTAATGATACTATTGTCCAGAAGTTGACGCTATCTCAGGCTAGTGATGCAAGAGATGCTTTGGCGAAGTCAATATATTCATGTCTGTTTGATTGGCTGGTTGAACAAATAAACAAATCACTAGCTGTTGGCAAAAGACGAACTGGCAGATCTATCAGTATTCTAGATATTTATGGCTTTGAGTCATTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAAAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTGGAACAGGAGGAATACATCCAAGACGGCATTGATTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAAAAGAAACCACTGGGGCTACTATCCTTGTTAGACGAAGAGTCCACTTTTCCGAATGGTACGGATTTATCATTTGCAAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGCTTCAAAGGAGAACGAGAAAAAGCCTTTACTGTGCATCATTATGCAGGAGAGGTCACCTATGATACAACTGCATTCCTAGAGAAAAACAGGGACCTATTGCACGTGGATTCCATCCAACTTCTATCCTCAAGCAAATGTCATCTTCCTCAGATATTTGCATCCTATATGCTTACTCAGTCTGAGAAGCCTGTAGTTGGTCCCTTACACAAGTTAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGACAATTGTTTCAATTGATGCAACGTTTAGAGAGTACCACACCTCATTTTATTCGCTGCATTAAGCCCAATAACCTCCAGTCACCTGGATCATATGAGCAAGGACTTGTACTGCAGCAGTTGAGATGTTGCGGGGTCCTAGAAGTGGTTCGAATATCCCGATCAGGATTTCCAACTAGAATGTCTCACCAAAAGTTTGCGAAAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAGGACCCACTTAGTGTTTCTGTTGCTATTCTTCATCAGTTTAACATTTTGCCTGAAATGTATCAAGTTGGCTACACAAAATTGTTCTTCCGAACAGGGCAGATTGGAGTGCTCGAAGATACTAGGAACCGTACCCTCCATGGCATTTTACGTGTACAAAGTTGCTTTAGGGGTTATCAAGCTCGTTGTCATCGCAAGGAGCTTTGGAGAGGAATCACTACTCTTCAGTCATTTATTAGAGGAGAGAAAAGCAGAAAGGGGTTTGCAACTTTGCTTCAGAGACATAGAGCTGCTGTTATTATACAGAAGCACGTGAAAACAGTATATCAAAGTAAAAGAATGAAAGTTACCATTGATGCTGCAGTTGTCATACAGTCAATTATTCGTGGATGGTTAGTCAGAAGATGCTCAGGAGATATAGGATTTTTAAATTCTGGAGGCATGAAGACCAACGAGCCAGATGAGGTTCTGGTGAAGGCGTCTTTCCTAGCCGAATTACAACGCAGGGTGCTTAAGGCCGAAGCTGGCCTGAGAGAGAAAGATGAGGAAAATGACATCCTTCATCAACGTCTTCAACAGTATGAGAGCAGATGGTCAGAATATGAACTAAAAATGAAATCCATGGAAGAAGTATGGCAGAAACAAATGAGATCCTTACAATCTAGTCTCTCCATTGCAAAGAAGAGCCTTGCTATGGATGATTCTGAAAGAAATTCAGATGCTTCTGTTAATGCAAGTGAAGACAGGGAATATAGCTGGGATACTGGCAATAATCACAGGCGCCAAGAAAGCGGTGGAACAAGATCTATGAGTGCTGGTTTGAGCGTTATAAGTCGGTTGGCTGAAGAATTTGAGCAAAGGAGTCAAGTATTTGGCGATGACGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAAATTGAAGCAAGTTTGAACCCAGACCGAGAACTTAGAAGGTTAAAACAAATGTTTGAAGGTTGGAAAAAGGACTATGCTGCAAGACTGCGTGAAACAAAGGTTATTTTAAATAAACTTGGAAGTGAAGATGGTTCAATAGAGAAAGCCAAGAAAAAGTGGTGGGGAAGAAGGAACAGTACTAGGATGAGTTAA 3558 0.4042 MSHTTSVPPAFQSIKSLPPEFKFDNNRNSGLAEKHRNIKGRSTDLIRSNARENGAIVGEVSKEAHNRAGGMDLSDEESPYGGNGESFEDRQSYANDDSISASLPQPSISTSSRESRWSDTTPYASKKKLQSWLQLSNEDWELVKIISTSGTESVISLPDGKVLKVKDESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQHRYNQNLIYTKAGPVLVAINPFKKVPLYGIDYIEAYKRKAIESPHVYAITDSAIREMIRVIFELGPIIILILIICIYSGESGAGKTETAKIAMQYLAALGGGSGIEHEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLRSAEDYKYLRQSNCYSINGVDDAEEFRIVTDALDVVHISKGDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLFSTAKLIGCDIEDLKLTLSTRKMKVGNDTIVQKLTLSQASDARDALAKSIYSCLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLSFANKLKQHLNSNSCFKGEREKAFTVHHYAGEVTYDTTAFLEKNRDLLHVDSIQLLSSSKCHLPQIFASYMLTQSEKPVVGPLHKLGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFAKRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQARCHRKELWRGITTLQSFIRGEKSRKGFATLLQRHRAAVIIQKHVKTVYQSKRMKVTIDAAVVIQSIIRGWLVRRCSGDIGFLNSGGMKTNEPDEVLVKASFLAELQRRVLKAEAGLREKDEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASEDREYSWDTGNNHRRQESGGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQIEASLNPDRELRRLKQMFEGWKKDYAARLRETKVILNKLGSEDGSIEKAKKKWWGRRNSTRMS* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0158 1185 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 1184 - -
Mal1g0158 1185 ProSiteProfiles Myosin motor domain profile. 179 860 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g0158 1185 PANTHER MYOSIN 9 1184 - -
Mal1g0158 1185 Gene3D Myosin VI head, motor domain, U50 subdomain 431 728 - -
Mal1g0158 1185 SMART iq_5 861 883 IPR000048 GO:0005515
Mal1g0158 1185 SMART iq_5 910 932 IPR000048 GO:0005515
Mal1g0158 1185 SMART iq_5 933 955 IPR000048 GO:0005515
Mal1g0158 1185 SMART iq_5 884 906 IPR000048 GO:0005515
Mal1g0158 1185 Gene3D - 370 429 - -
Mal1g0158 1185 Coils Coil 980 1028 - -
Mal1g0158 1185 Gene3D - 556 750 - -
Mal1g0158 1185 ProSiteProfiles IQ motif profile. 864 891 IPR000048 GO:0005515
Mal1g0158 1185 PRINTS Myosin heavy chain signature 272 297 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g0158 1185 PRINTS Myosin heavy chain signature 314 341 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g0158 1185 PRINTS Myosin heavy chain signature 546 574 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g0158 1185 PRINTS Myosin heavy chain signature 599 627 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g0158 1185 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g0158 1185 Pfam Myosin head (motor domain) 181 848 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g0158 1185 CDD MYSc_Myo8 193 848 IPR036022 -
Mal1g0158 1185 Gene3D - 913 954 - -
Mal1g0158 1185 Gene3D - 864 912 - -
Mal1g0158 1185 MobiDBLite consensus disorder prediction 1 30 - -
Mal1g0158 1185 Pfam IQ calmodulin-binding motif 936 952 IPR000048 GO:0005515
Mal1g0158 1185 Pfam IQ calmodulin-binding motif 866 881 IPR000048 GO:0005515
Mal1g0158 1185 MobiDBLite consensus disorder prediction 1047 1061 - -
Mal1g0158 1185 MobiDBLite consensus disorder prediction 93 120 - -
Mal1g0158 1185 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mal1g0158 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 908 IPR027417 -
Mal1g0158 1185 ProSiteProfiles IQ motif profile. 887 914 IPR000048 GO:0005515
Mal1g0158 1185 SMART MYSc_2a 173 861 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal1g0158 1185 MobiDBLite consensus disorder prediction 57 120 - -
Mal1g0158 1185 ProSiteProfiles IQ motif profile. 936 963 IPR000048 GO:0005515
Mal1g0158 1185 MobiDBLite consensus disorder prediction 1047 1087 - -
Mal1g0158 1185 Gene3D Kinesin motor domain 182 789 IPR036961 -
Mal1g0158 1185 Gene3D - 793 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0158 Mal-Chr1 1733904 1744996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0158 1 1183 Myosins gene family AT1G50360 74.599 0.0 1778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0158 - - gmx:100801124 2044.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0158 1 1733904 1744996 Mal1g0158 1 1733904 1744996 ECH