Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0153 ATGTCGGAAACACCGTCTCAGCCACCACCTTCCGCCTCTGAAACCCTACCTCCATATTGGTGCTACCACTGCGACAAACGCGTCTCCGTGGAAACCGTTGCAAATCTCCCCGACCTTATCTGCGGCGATTGCAAAAACGGATTCGTCGAATCAATCTCCACACCTTCTCGCTCTCGGTCTCCTTCTTCCTCCTCCGATGATCCCAATTTCGGTTCACAGTTTCTTCAGGTTCTTCGCCTAATCGCTCAATCGTCGCGTGACGACGACGCGTCTCCACCACCTCCACCAAGTCGTTCACCGGAGAATGATTTTCTTAGAATCGAACTCGGTGGTTGGGACCATGACGGTGAAGACAACGAAGAAGACGAGTTTCATAACGACGGTGAAGATCACGAAGGTACCGTTGAGGAGCTTGAAGAACGATTGGGAATCGAGGATCCACACGGGGACGATGAAGATATGAGACGAAGGAGACGCGATCTGTTACGTCATCGAATTAGGGATTTGGCGACCCGAACCCGAAGCATGCAGAATCGGATCTTGGATTGGGCTGAAATTCTAATGGGACTCGAAGACAATTCGATTGAGTTTCGTCTTCAGGCACCGGAATTGGACCGGTACGTCGGAAATCCTGAGGATTACGTTGATGCGGCGGAGTATGAGGCGTTGCTGCAGACGCTGGCGGAGAATGATGGAAATGGGAGGAGAGGAGCTCCGCCGGCGGCAAAGTCGGCGGTTGAAGCATTGCCAACGGTGAAGATTGCGGCGGGGAGTGAGGTAGTTGCTTGTGCTGTATGTAAGGATATGCTTGGTGTTGGAGATATGGCGAAGAGATTGCCGTGTGGGCATGAGTATCATGGTGATTGTATTGTTCCATGGTTGAGTTGTAGAAATTCTTGTCCTGTTTGCAGGTTTGAGCTTCCAACTGATGATAAGGAGTATGAAGAAGAAAGAGCTTCTGGTTCCGGTCGTGGTGGTGGTGGAGCTTCCACCATTTGA 999 0.5125 MSETPSQPPPSASETLPPYWCYHCDKRVSVETVANLPDLICGDCKNGFVESISTPSRSRSPSSSSDDPNFGSQFLQVLRLIAQSSRDDDASPPPPPSRSPENDFLRIELGGWDHDGEDNEEDEFHNDGEDHEGTVEELEERLGIEDPHGDDEDMRRRRRDLLRHRIRDLATRTRSMQNRILDWAEILMGLEDNSIEFRLQAPELDRYVGNPEDYVDAAEYEALLQTLAENDGNGRRGAPPAAKSAVEALPTVKIAAGSEVVACAVCKDMLGVGDMAKRLPCGHEYHGDCIVPWLSCRNSCPVCRFELPTDDKEYEEERASGSGRGGGGASTI* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0153 332 MobiDBLite consensus disorder prediction 85 104 - -
Mal1g0153 332 MobiDBLite consensus disorder prediction 109 153 - -
Mal1g0153 332 MobiDBLite consensus disorder prediction 52 71 - -
Mal1g0153 332 SUPERFAMILY RING/U-box 262 310 - -
Mal1g0153 332 Pfam zinc-ribbon 19 52 IPR039525 GO:0061630
Mal1g0153 332 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 33 320 - -
Mal1g0153 332 SMART ring_2 263 303 IPR001841 -
Mal1g0153 332 ProSiteProfiles Zinc finger RING-type profile. 263 304 IPR001841 -
Mal1g0153 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 310 IPR013083 -
Mal1g0153 332 MobiDBLite consensus disorder prediction 313 332 - -
Mal1g0153 332 MobiDBLite consensus disorder prediction 128 153 - -
Mal1g0153 332 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 33 320 - -
Mal1g0153 332 Pfam Zinc finger, C3HC4 type (RING finger) 263 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0153 Mal-Chr1 1710823 1711821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0153 103 316 C3H Transcription Factor Family AT5G01980 39.352 3.81e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0153 - - adu:107467499 483.026