Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0133 ATGGCACCAAAAGGAGCAAAAAGGGTTGATGCGGTCGATTCTCAATCCGCTTCCGTTCTCGTTCGTGGAAAAGATGGCAGTGCTTTCGCTAAATGTGCTGAGTGTAAGAAAGATGTTCCTGTTGCACTCATTGACATGCACAGTTGTAGCCTTGAAGCCAAAATCAGAATGAATCTCGAGTCTCAAGTTGTTGAGCAAGCTGCTGAAGTGAAGAAACCTGAGAGGAAGAAGCCTAATTCAAAAGAACCAAATGCGAAAAGGGCTAAAGTTGGGAAAGGGAAAAAGGTCAAGGACCCTAATGCGCCAAAGCGTCCTCCTACTGCTTTCTTTGTTTTCATGGATGAGTTTAGAAAGATTTTTAAGGAAGCTAACCCTGATTCCAAGGATGTTAAAAGGGTTAGTAAGGAAGCTGGTGAGAAGTGGAGGTCTTTGACTGATGAAGAGAAGAAGCCTTATTTGGATAGAGTTGCTGAATTGAAGGCTGAATATGAGAAGGCCATGGAAGCCTATAATGCTGCTGAACCTGCTGAAAATGAAGATCAAGAGGGTTCTGATAAGGAAGATAAGGAAGCACACTCTGATGATAAGGAAGCCCCTGCTGCTGGAGAGGTGGAAGAGTTAACAGATGAGGAGTAG 636 0.4387 MAPKGAKRVDAVDSQSASVLVRGKDGSAFAKCAECKKDVPVALIDMHSCSLEAKIRMNLESQVVEQAAEVKKPERKKPNSKEPNAKRAKVGKGKKVKDPNAPKRPPTAFFVFMDEFRKIFKEANPDSKDVKRVSKEAGEKWRSLTDEEKKPYLDRVAELKAEYEKAMEAYNAAEPAENEDQEGSDKEDKEAHSDDKEAPAAGEVEELTDEE* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0133 211 MobiDBLite consensus disorder prediction 123 153 - -
Mal1g0133 211 Pfam HMG (high mobility group) box 102 171 IPR009071 -
Mal1g0133 211 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 3 196 - -
Mal1g0133 211 MobiDBLite consensus disorder prediction 185 203 - -
Mal1g0133 211 MobiDBLite consensus disorder prediction 67 101 - -
Mal1g0133 211 CDD HMGB-UBF_HMG-box 102 168 - -
Mal1g0133 211 SUPERFAMILY HMG-box 89 171 IPR036910 -
Mal1g0133 211 MobiDBLite consensus disorder prediction 167 211 - -
Mal1g0133 211 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 102 171 IPR009071 -
Mal1g0133 211 SMART hmgende2 101 172 IPR009071 -
Mal1g0133 211 Coils Coil 153 173 - -
Mal1g0133 211 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 3 196 - -
Mal1g0133 211 MobiDBLite consensus disorder prediction 66 107 - -
Mal1g0133 211 Gene3D High mobility group box domain 88 171 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0133 Mal-Chr1 1508319 1509626 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal1g0133 HMG_box 3.4e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0133 K25507 - gmx:100306558 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0133 1 1508319 1509626 Mal1g0133 1 1508319 1509626 ECH