Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0103 ATGATGGTTTCCAGAGGGCTATTCGGGTGGTCACCACCACACGTGCAACCGTTAACACCTGTCTCTGAGGTTTCCGAGCCGCCGGAGTCACCGTCACCGTACATGGACATCGGCGGAGAGACTTCGGCGTCACAGCAAATGGAAGCGGAGGAGGAAATGGAAGAGATGGAGGATATTGAGTCGCCGCCAGCTGCTGTTCCTTTCTCTCGGTTATTTGCGTGTGCTGACCGGTTTGACTGGTTTCTTATGGTGGTTGGTTCCGTCGCTGCGGCGGCTCATGGAACTGCGCTTGTTGTTTACTTGCATTACTTTGCTAAAGTTATTCAAGTTCCTCAACATCAACATCAGGATATGTTTCATAGGTTCAAGGAGCTTGCTTTGACCATTGTTTATATTGCTGGTGGTGTTTTCGTTGCTGGTTGGATTGAGGTTTCATGTTGGATTCTTACGGGAGAACGGCAGACAGCCGTCATCAGATCAAAATATGTTCGAGTATTACTTAACCAAGATATGAGTTTCTTCGATACTTATGGGAATAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTACTGCTCATTCAGTCTGCTCTCAGTGAAAAAGTTGGGAATTATATTCATAATATGGCTACATTCTTCAGTGGTCTTGTTATTGCTTTTATCAATTGTTGGCAGATAGCATTGATAACATTGGCTACAGGTCCATTTATTGTTGCGGCAGGAGGAGTATCAAATATATTCCTTCATAGGCTTGCAGAGAATATCCAAGATGCATATGCCGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCCTATATACGGACCTTGTCTGCATTTACAAATGAAACATTGGCTAAATATTCATATGCAACGTCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTCCAAGGGCTTGGCCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGTTCTTGGTTATACATGGAAAAGCTCACGGCGGGGAAATTATAACAGCTCTGTTTGCTGTCATTCTAAGTGGCTTGGGATTAAACCAAGCGGCGACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCGTATAGACTATTCGAGATGATAAGCCGGTCATCCTCATCTTTTGATCATGACGGAAGTGCTCCTGTGTCTGTGCAAGGAAATATAGAGTTTCGGAATGTTTACTTCAGTTATCTTTCACGCCCTGAAATCCCTATCTTAAGTGGGTTTTATCTCACGGTTCCTGCTAAGAAAACTGTGGCACTTGTTGGCAGAAATGGTTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGGTTCTATGATCCAACATTAGGAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGCTGAGGAGCCAAATAGGACTGGTCACCCAGGAACCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCATATGGGAGGGATACCACAGCGGATCAAATTGAAGAGGCTGCTAAAATAGCTCACGCACATACTTTTATCAGTTCGTTAGATAAAGGTTATGATACACAGATTGGCAGAGCCGGTTTAGCTTTGACAGAAGAACAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCAATTCTACTGCTTGATGAGGTTACTGGCGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCTCTGGATCTCCTTATGCTGGGGCGCTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATAAAGAATGCTGATTATATAGCAGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCACGATGAATTATTGTCCCTGGGTGGCTTATATGCAGAGCTACTTCGTTGTGAAGAGGCCACTAAACTTCCAAAGAGGATGCCTGCTCGCAACTACAAGAAGACTGCAGCTTTCCAAATCGAGAAAGATTCTTCAGAAAGTCATAGCTGCAAAGAACCATCATCCCCTAGAATGATGAAGTCACCTTCTCTTCAAAGAATATCTGCTGTATTTCGGCCTTCAGATGGCTTCTTTAACTTACAAGAATCACCACAAGTGCAGAGCCCACCACCTGAGAAGATGATGGAAAATGGTCAGTCTTTGGATTCAACCGAGAAAGAGCCGTCAATAAAAAGGCAGGATAGCTTTGAAATGAGACTACCCGAGTTACCCAAGATTGATGTTCAGTCGGTGCATCGTCAAACATCAAATGGTTCTGACCCAGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCTAAAAATGAACGCTCCCATTCACAAACATTTAGCAGACCAGATAGTTATTCTGATGAATTTTCAGTGAAAATGAACGAAACAAAGGATGCACGGCATCGAGGTCAACCCTCATTTTGGAGACTGGCAGAGCTTAGTTTTGCTGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGCGCTGCAATCTTTGGTGCATTCAATCCCCTTCTTGCTTATGTTATTGGCCTGGTGGTGACAACTTACTATCAAATTGATGACACTCATCACTTGCGGGGGGAGATAGAAAAGTGGTGTTTGATCATTGCATGCATGGGTATTGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATAATGGGGGAGAAAATGACCGAAAGAGTCCGGAGAATGATGTTCTCAGCCATGCTACGTAATGAAATTGGATGGTATGATGATGAGGAAAACAGTGCCGACAATTTATCCATGCGTTTGGCCAATGATGCTACGTTTGTGCGAGCTGCTTTCAGCAACAGACTTTCTATATTTATACAGGACATCGCTGCAATTATTGTTGCTTTTATCATTGGTGTTTTGCTGCACTGGAGAATAGCTCTTGTGGCTTTAGCAACACTTCCGGTTCTGTGTGTTTCTGCTATTGCCCAGAAATTGTGGCTTGCTGGTTTTTCAAGGGGCATACAGGAAATGCACCGAAATGCATCTTTGGTTCTTGAAGATGCAGTTAGAAATATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTAATGGAACTCTACAGGCTGCAGTTAAATAGAATATTTAAGCAGAGCTTTCTTCATGGACTGGCCATTGGTTTTGCATTCGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTCTACTCTGGTACACTGCAATATGTATAAACAAGAGTTATGTAGATGCATCTACTGCACTCAAGGAGTACATCGTTTTCTCATTTGCTACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTCAAGCGACGTAAATCTCTCATTTCAGTGTTTGAAATTATAGATCGCGTGCCTAAAATTGATCCTGATGAAAGCTCAGCCTTGAAGCCTCCCAATGTATATGGAAGCATTGAGTTGAAAAATGTTGATTTTTGTTATCCCACTCGGCCAGAAGTGCTGGTATTAAGCAATTTCAGTCTCAAAGTCAGTGGGGGGCAAACAATTGCTGTTGTTGGAGTTTCAGGGTCAGGAAAGAGCACTATTATATCTTTGATGGAGAGATATTATGATCCAGTTGCTGGCCAAGTTTTACTGGATGGGAGGGATTTAAAACTCTATAATCTGAAATGGCTTAGGAGCCACCTTGGTTTGGTTCAGCAGGAACCAATTATATTCTCAACAACCATAAGGGAAAACATCATATATGCCAGACATAATGCCAGTGAAGCTGAAATGAAAGAGGCCGCAAGAATAGCTAATGCTCATCATTTCATTAGTAGCCTGCCTCATGGTTATGATACTCATGTTGGAATGAGAGGTGTTGACTTAACTCCAGGACAGAAACAGAGGATTGCAATTGCAAGGGTAGTGCTGAAAAATGCACCTATCTTGTTGTTGGATGAAGCTAGCTCCTCAATTGAATCAGAGTCGAGCCGAGTAGTGCAAGAGGCTCTGGACACTCTAATAATGGGAAACAAGACCACTATTTTAATAGCTCACAGGGCTGCCATGATGAGGCATGTAGACAACATAGTTGTACTTAATGGAGGACGGATAGTGGAAGAGGGGACCCATGATTCATTGGTGGCTAAGAATGGTTTGTATGTCCGATTAATGCAACCTCATTTTGGTAAGGCTTTGCGTCAGCATCGGCTTATTTAG 4197 0.4244 MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYMDIGGETSASQQMEAEEEMEEMEDIESPPAAVPFSRLFACADRFDWFLMVVGSVAAAAHGTALVVYLHYFAKVIQVPQHQHQDMFHRFKELALTIVYIAGGVFVAGWIEVSCWILTGERQTAVIRSKYVRVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGVSNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLSAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFDHDGSAPVSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDTTADQIEEAAKIAHAHTFISSLDKGYDTQIGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLSLGGLYAELLRCEEATKLPKRMPARNYKKTAAFQIEKDSSESHSCKEPSSPRMMKSPSLQRISAVFRPSDGFFNLQESPQVQSPPPEKMMENGQSLDSTEKEPSIKRQDSFEMRLPELPKIDVQSVHRQTSNGSDPESPVSPLLTSDPKNERSHSQTFSRPDSYSDEFSVKMNETKDARHRGQPSFWRLAELSFAEWLYAVLGSIGAAIFGAFNPLLAYVIGLVVTTYYQIDDTHHLRGEIEKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEIGWYDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDIAAIIVAFIIGVLLHWRIALVALATLPVLCVSAIAQKLWLAGFSRGIQEMHRNASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLNRIFKQSFLHGLAIGFAFGFSQFLLFACNALLLWYTAICINKSYVDASTALKEYIVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDESSALKPPNVYGSIELKNVDFCYPTRPEVLVLSNFSLKVSGGQTIAVVGVSGSGKSTIISLMERYYDPVAGQVLLDGRDLKLYNLKWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGKALRQHRLI* 1399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0103 1398 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 369 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g0103 1398 CDD ABC_6TM_Pgp_ABCB1_D2_like 821 1132 - -
Mal1g0103 1398 MobiDBLite consensus disorder prediction 699 724 - -
Mal1g0103 1398 MobiDBLite consensus disorder prediction 749 791 - -
Mal1g0103 1398 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 826 1118 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g0103 1398 Pfam ABC transporter transmembrane region 85 352 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g0103 1398 Pfam ABC transporter transmembrane region 830 1093 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g0103 1398 SUPERFAMILY ABC transporter transmembrane region 69 377 IPR036640 GO:0005524|GO:0016021
Mal1g0103 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 636 IPR027417 -
Mal1g0103 1398 MobiDBLite consensus disorder prediction 725 741 - -
Mal1g0103 1398 Gene3D - 392 639 IPR027417 -
Mal1g0103 1398 SUPERFAMILY ABC transporter transmembrane region 813 1134 IPR036640 GO:0005524|GO:0016021
Mal1g0103 1398 Gene3D - 1147 1386 IPR027417 -
Mal1g0103 1398 MobiDBLite consensus disorder prediction 699 791 - -
Mal1g0103 1398 MobiDBLite consensus disorder prediction 658 683 - -
Mal1g0103 1398 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 402 637 IPR003439 GO:0005524
Mal1g0103 1398 SMART AAA_5 1176 1363 IPR003593 -
Mal1g0103 1398 SMART AAA_5 429 608 IPR003593 -
Mal1g0103 1398 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1149 1386 IPR003439 GO:0005524
Mal1g0103 1398 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1394 - -
Mal1g0103 1398 Coils Coil 248 268 - -
Mal1g0103 1398 MobiDBLite consensus disorder prediction 18 44 - -
Mal1g0103 1398 Pfam ABC transporter 1167 1315 IPR003439 GO:0005524
Mal1g0103 1398 Gene3D ABC transporter type 1, transmembrane domain 1002 1146 IPR036640 GO:0005524|GO:0016021
Mal1g0103 1398 Gene3D ABC transporter type 1, transmembrane domain 767 991 IPR036640 GO:0005524|GO:0016021
Mal1g0103 1398 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 377 - -
Mal1g0103 1398 PANTHER ABC TRANSPORTER B FAMILY 19 1394 - -
Mal1g0103 1398 Pfam ABC transporter 423 567 IPR003439 GO:0005524
Mal1g0103 1398 Gene3D ABC transporter type 1, transmembrane domain 70 648 IPR036640 GO:0005524|GO:0016021
Mal1g0103 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1139 1385 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0103 Mal-Chr1 1240735 1249775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0103 59 695 Calmodulin-binding Proteins AT2G36910 43.472 2.42e-163 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0103 K05658 - gmx:100799399 2503.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0103 1 1240735 1249775 Mal1g0103 1 1240735 1249775 ECH