Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0085 ATGTGCAATATTATTTACTTAAGGATTCTCAGAGCCACGTCTAGCTTTAGGGGCTTCCGTGCTGCACCCAATGGCATTATATGCTGTGGCTTTCTATCTGGAAGTCAAAATGGAAGGATCAGCTATGGATATTCCAGTATCAAGGGGAAAAGATCTTCAATGGAGGATTTCTTTGAGACTAGAGTATCAGAGGTTGATGGTCAGATGGTTGGCTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCACGAACTGCAGAATACCTGAAAAATAATTTATTCAAGAATTTGTGTAATCACCCCAACTTCATCAAAGACACTAAGACAGCTATTGTTGAAGCATTTAAACAAACTGACGTTGATTACCTCAATGAGGAAAAGGGACATGCTGGGTCCACTGCATCAACAGCGGTGTTGTTGGGCGACCGAATTCTTGTTGCAAATGTTGGTGATTCCCGAGTAGTTGCTTCGAGAGCTGGTTTAGCTGTTCCTTTATCTGTTGATCACAAACCTGATAGATCTGATGAGCGCCAAAGGATTGAAAAGGCTGGGGGATTCGTAATATGGGCAGGAACATGGAGGGTTGGTGGTATTCTTGCTGTTTCCCGTGCATTTGGAGACAAGCTTCTTAGGCCATATGTTATTGCTGACCCAGAAATTCAGGAGGAAGAAATTGAAGGCGTGGACTTTATAATAATCGCCAGTGATGGGCTTTGGAATGTTATATCAAACGAGGAGGCCGTGTCATTAGTACAAAATATCACTGATGCAGAAGTGGCATCAAAAGAACTTATTAAAGAAGCTTATACGCGAGGAAACTCAGACAACATCACTTGTGTCGTTGTTCGATTTGATCGATCCTGA 861 0.4216 MCNIIYLRILRATSSFRGFRAAPNGIICCGFLSGSQNGRISYGYSSIKGKRSSMEDFFETRVSEVDGQMVGFFGVFDGHGGSRTAEYLKNNLFKNLCNHPNFIKDTKTAIVEAFKQTDVDYLNEEKGHAGSTASTAVLLGDRILVANVGDSRVVASRAGLAVPLSVDHKPDRSDERQRIEKAGGFVIWAGTWRVGGILAVSRAFGDKLLRPYVIADPEIQEEEIEGVDFIIIASDGLWNVISNEEAVSLVQNITDAEVASKELIKEAYTRGNSDNITCVVVRFDRS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0085 286 SMART PP2C_SIG_2 53 283 IPR001932 -
Mal1g0085 286 PANTHER ALPHABET, ISOFORM E-RELATED 30 286 - -
Mal1g0085 286 SMART PP2C_4 30 281 IPR001932 -
Mal1g0085 286 ProSiteProfiles PPM-type phosphatase domain profile. 41 283 IPR001932 -
Mal1g0085 286 Pfam Protein phosphatase 2C 42 276 IPR001932 -
Mal1g0085 286 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Mal1g0085 286 CDD PP2Cc 40 283 IPR001932 -
Mal1g0085 286 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 30 286 - -
Mal1g0085 286 SUPERFAMILY PP2C-like 32 284 IPR036457 -
Mal1g0085 286 Gene3D - 33 286 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0085 Mal-Chr1 981220 983977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0085 23 286 PP2C-type Phosphatase Gene Family AT1G43900 70.000 3.85e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0085 K17506 - gmx:100776867 457.988