Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0072 ATGTCGTCTCGCATTGTAGCGGAAGATGTTCCCGATTCTTATTTCGACTTCATGGAAATGGATGACTTCACGCGCCGCCGTACCGCCGGCGATATGCCGACACTCGGACAGCTTCTCAAACACGTTGGAGATGTACGAAAGGAAGTTACCGGCGACGGAAGTGAGACGCCGGTGCACCATACTCTTGACGTTGCCGGAATGGAGCCTCGCTCACTTCCTTTTGTTCTCTCTTTCAACAATCTCACCTACAGTGTTAAGATACGCCAGAAAATGAACTTCACCGATATATTTTCTCGCCGCCGTGCTTCTCCAATAGCTGATACTCCGGCGGCTGGGGAGATTGCTTTCGCACGGACTAAGACTCTACTGAACGACATCTCCGGCGAAGCACGAGATGGCGAGATCATGGCGTTTCTCGGAGCTAGTGGCTCTGGGAAGTCAACTCTGATTGATGCTCTAGCAAACAGAATCGCAAAAGGAAAATTGAAAGGAACGGTGAAGCTGAACGGCGAAATGGTAGAGTCTCGTCTTCTGAAGGTGATTTCAGCTTATGTGATGCAAGACGATCTCCTCTTTCCAATGCTTACCGTTGAAGAAACTCTTACCTTCGCTGCTGAATTCCGATTGCCACGATCACTCTCAAAATCAAAGAAAAACGCACGTGTCCAGGCCTTAATTGATCAACTAGGACTCCGCAACGCCGCGAAAACAGTTATCGGAGACGAAGGACACCGTGGAGTTTCCGGTGGAGAACGACGTCGAGTCTCAATCGGAATTGACATAATTCATGATCCAATTGTATTGTTTCTTGATGAACCAACTTCAGGACTTGATTCGACAAGTGCTTTCATGGTTGTGAAAGTGCTTCAGAGAATAGCACAGAGTGGAAGCATCGTGATCATGTCAATTCATCAACCAAGTTACAGAATCTTAGGTCTTCTAGATCGTATGATCTTCTTATCTCGTGGACAAACAGTTTACAGCGGTTCACCGTCGCAATTGCCTTCATACTTTGCAGAGTTCGGTCATCCCATACCTGAAGGTGATAACCGTACAGAGTTCGCGTTAGACCTGATTCGCGAACTCGAAGGTTCACCAGGAGGAACAAAAAGCTTAGTAGAATTCAACAAATCATGGCAAAGCATGACCAAACTTCACAACAACAACAACAACAACAATGACGTTTCACAAAATGCAACGTCGTCGTTGTCGTTGAAGGAAGCAATTAGTGCTAGCATTTCAAGAGGGAAACTAGTTTCTGGCGCAACAGCTGCAACCAATTCAAATGCAATAGCCGCATCACCATCTTCGTCGTCGTCGTCTTCAATGGTTCCTACTTATGCAAATCCGTTTTGGATTGAGTTATTAACTCTTTCGAAGCGTTCAATTACTAATTCAAGGCGAATGCCTGAACTATTCGGGATAAGATTGGGTGCGGTTATGGTAACTGGTTTCATTCTTGCAACAATGTTTTGGCAACTTGATAACACTCCAAAAGGAGTACAAGAAAGGCTTGGATTCTTTGCTTTTGCTATGTCAACTACTTTTTACACCACCGCAGATGCACTACCAGTTTTCATTCAAGAAAGGTTCATTTTCATGAGAGAAACTTCTCACAATGCTTATAGGAGATGGTCTTATGTGATTTCTCATGCTCTTGTTGCTTTGCCTGCTTTGTTGTTTCTTTCACTTGCTTTTGCCTCCATAACATTTTGGGCTGTTGGGCTTGATGGTGGATTCTCGGGCTTTTTGTTTTACTTTGTTATTATTCTTGCTTCATTTTGGGCCGGGAACTCGTTCGTCTCATTTCTTTCAGGTGTGGTTCCTCATGTGATGTTGGGGTACACTATTGTGGTTGCAATTCTTGCTTATTTCTTATTGTTTAGTGGGTTCTTTATTAATAGGGATAGAATCCCTGGGTATTGGATTTGGTTCCATTACATGTCATTGGTTAAGTATCCTTATGAAGCTGTATTGCAGAACGAGTTTAGTGATGCTGCTAAGTGTTTTGTGAGGGGGGTGCAGATTTTTGATAACTCACCTCTTGCTTCAGTGTCTGATGCACTCAAGTTGAAGTTGTTGGATAGTATGAGTAACACGCTAGGAATGAAAATCACAGCTTCTACTTGTTTGACAACTGGTACTGATTTGTTGAAGCAAAATGGGGTGACGGATTTGAGCAAGTGGAACTGTTTGTGGATAACTGTGGCTTGGGGTTTCTTCTTCAGGATTCTATTCTACTTGTCTTTGTTGGTGGGTAGCAAGAACAAGAGGAGTTGA 2280 0.439 MSSRIVAEDVPDSYFDFMEMDDFTRRRTAGDMPTLGQLLKHVGDVRKEVTGDGSETPVHHTLDVAGMEPRSLPFVLSFNNLTYSVKIRQKMNFTDIFSRRRASPIADTPAAGEIAFARTKTLLNDISGEARDGEIMAFLGASGSGKSTLIDALANRIAKGKLKGTVKLNGEMVESRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRSLSKSKKNARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPSQLPSYFAEFGHPIPEGDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMTKLHNNNNNNNDVSQNATSSLSLKEAISASISRGKLVSGATAATNSNAIAASPSSSSSSSMVPTYANPFWIELLTLSKRSITNSRRMPELFGIRLGAVMVTGFILATMFWQLDNTPKGVQERLGFFAFAMSTTFYTTADALPVFIQERFIFMRETSHNAYRRWSYVISHALVALPALLFLSLAFASITFWAVGLDGGFSGFLFYFVIILASFWAGNSFVSFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPGYWIWFHYMSLVKYPYEAVLQNEFSDAAKCFVRGVQIFDNSPLASVSDALKLKLLDSMSNTLGMKITASTCLTTGTDLLKQNGVTDLSKWNCLWITVAWGFFFRILFYLSLLVGSKNKRS* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0072 759 Pfam ABC-2 type transporter 304 402 IPR043926 GO:0140359
Mal1g0072 759 Gene3D - 113 340 IPR027417 -
Mal1g0072 759 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 34 752 - -
Mal1g0072 759 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 34 752 - -
Mal1g0072 759 SMART AAA_5 132 324 IPR003593 -
Mal1g0072 759 ProSitePatterns ABC transporters family signature. 247 261 IPR017871 GO:0005524
Mal1g0072 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 339 IPR027417 -
Mal1g0072 759 Pfam ABC-2 type transporter 455 663 IPR013525 GO:0016020|GO:0140359
Mal1g0072 759 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 91 347 IPR003439 GO:0005524
Mal1g0072 759 Pfam ABC transporter 123 275 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0072 Mal-Chr1 864571 866850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0072 122 334 Calmodulin-binding Proteins AT2G36910 28.636 1.10e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0072 K05681 - gmx:100803658 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0072 1 864571 866850 Mal1g0072 1 864571 866850 ECH