Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0067 ATGGCGATTCGAAGCTTGGAGAAGATGGAGTTCGAGACAACTGAGGGTGTGATGGCGAGTGAGAGCTTCGATGAGATGGGAATAAAACACGATTTACTCCGTGGAATCTACCAGTACGGTTTCGACAAACCCTCTTCGATTCAACAGCGTGCCGTTGTGCCTATCATTCAGGGTCGTGACGTCATCGCTCAGTCTCAATCTGGAACCGGCAAGACCTCCATGATTGCTCTCACTGTTTGCCAGATTATCGATACCTCCGTCCGTGAGTTGCAGGCTTTAATTGTGTCTCCGACAAGGGAACTGTCCTCACAAACTGAAGAAGTTATTTTGGCTATTGGAGATTACATAAATATAGGAGCGCATGCATGCATTGGAGGCAAAAGTGTGGGAGATGACATAAGGAAACTTGAACACGGAGTTCATGTAGTGTCTGGAACTCCTGGTCGCGTCCTTGACATGATCAAGAGGAGAACATTGTGCACAAGAGCTATCAAGTTGCTTGTGCTGGATGAATCTGATGAAATGCTGAGCAGAGGATTTAAAGATCAAATTTATGATGTGTATAGATATCTCCCACCGAATCTTCAGGTTTGCTTGATTTCTGCTACACTACCTCGTGAAATTTTGGAGATGACAAATAAGTTTATGACAGATCCTGTGAGGATCCTTGTAAAACGTGATGAATTGACATTGGAGGGCATCAGGCAATTTTTTGTTGATGTTGAAAGGGAGGAATGGAAATTTGATACTCTTTGTGATCTTTATGATCGTCTTACCATCACTCAAGCTGTTATATTCTGTAACACCAAGCGAAAGGTGGACTGGTTAACTGAAAAAATGCGAAAACATAATTTCACTGTCTCATCAATGCATGGTGATATGCCTCAAAGAGAAAGAGATGCAATTATGGAAGAATTTCGTGCTGGAACAACTCGAGTATTGATAACAACCGATGTTTGGGCTCGTGGCCTTGATGTACAGCAGGTTTCTTTAGTCATTAATTATGACCTTCCAAATAATCGAGAGCTGTACATTCATCGGATTGGCCGTTCTGGACGTTTTGGACGAAAGGGTGCTGCAATAAATTTTGTGAAAAGCGATGATATCAAGATCTTGAGAGATATTGAGCAATATTACAGTATTCAGATTCTTGATCTGCCAATGAATGTTGCTGATATTATATAA 1185 0.4177 MAIRSLEKMEFETTEGVMASESFDEMGIKHDLLRGIYQYGFDKPSSIQQRAVVPIIQGRDVIAQSQSGTGKTSMIALTVCQIIDTSVRELQALIVSPTRELSSQTEEVILAIGDYINIGAHACIGGKSVGDDIRKLEHGVHVVSGTPGRVLDMIKRRTLCTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPNLQVCLISATLPREILEMTNKFMTDPVRILVKRDELTLEGIRQFFVDVEREEWKFDTLCDLYDRLTITQAVIFCNTKRKVDWLTEKMRKHNFTVSSMHGDMPQRERDAIMEEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGAAINFVKSDDIKILRDIEQYYSIQILDLPMNVADII* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0067 394 Pfam DEAD/DEAH box helicase 46 208 IPR011545 GO:0003676|GO:0005524
Mal1g0067 394 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 52 222 IPR014001 -
Mal1g0067 394 PANTHER BNAC03G41130D PROTEIN 7 387 - -
Mal1g0067 394 SMART ultradead3 40 237 IPR014001 -
Mal1g0067 394 Pfam Helicase conserved C-terminal domain 247 355 IPR001650 -
Mal1g0067 394 CDD SF2_C_DEAD 234 364 - -
Mal1g0067 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 377 IPR027417 -
Mal1g0067 394 CDD DEADc_EIF4AIII_DDX48 23 223 - -
Mal1g0067 394 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 233 394 IPR001650 -
Mal1g0067 394 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 7 387 - -
Mal1g0067 394 Gene3D - 226 394 IPR027417 -
Mal1g0067 394 SMART helicmild6 274 355 IPR001650 -
Mal1g0067 394 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 21 49 IPR014014 GO:0003724
Mal1g0067 394 Gene3D - 5 225 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0067 Mal-Chr1 829719 832645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0067 7 394 Eukaryotic Initiation Factors Gene Family AT3G19760 82.990 0.0 686