Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0066 ATGGCATTTGGAATTGGAGGAGGAGGTCGCGTTCCAACCCTCCTCCGTGTCGGCTTGTCGCTGCATACCGTTGTTTTCAGCTTCTCTTCTTTGCCCCAATTTCAACCCCAGGTTTCTCCTCTCTACAATTTTTTGCCATGGTTGGAGAACAAAGCTTCTTCCACCATTTCTTCTTCCCTTTCTATTGCCAATTCTTCATATGGAAACTCCTTGTTCGCTTCTAAATCAATACAAACCGGTGATTGCATTTTACAAGTTCCTTACACTGTGCAATTAACTCCGGATAATCTCCCTTCTGAAATCACACATTTGATCAGTGAAGATGTTGGGAATATTGCAAAGCTCGCTATTCTTCTTCTAATTCACAAGAATTTGGGTCAGGACTCTGAATGGCATCCTTACATCAGCTGTCTTCCCCCGCAAGCTGAGATGCATAATACGATATTTTGGAATGGAAGTGAGTTGGAGATGATTCGTCAAAGTTCAGTTTATTGGGAAACTATTTACCAAAAGTCTCAAATCGAAAAGGACTTTTTGACAATCAAGCCAGTTTTTGAATCATTTTGTCAAAGTTTTGGAGATTTTACTTGCAAGGACTTCATGCACGCATGCACACAAGTTGGCTCTAGAGCATGGGGAAGCACAAAGGGTTTATCTCTGATTCCATTTGCAGATTTCTTAAATCATGATGGGATTTCTGAAGCAATTGTAATGAGTGATGATGACAAACAATGCTCAGAAGTTATCGCTGATCGAGATTATGTTCCTGGTGAACAGGTATTTATAAGATATGGAAAGTTTTCTAATGCTACATTGATGCTGGACTTCGGTTTTACAATTCCATACAACATTTATGATCAGGTTCAGATCCAGTTTGATATACCTCAGCATGATCCTCTGTGTGATATGAAATTGGAACTCTTCAAGCGATACTTTGTTCCTCCAACCAAAGATATGAAGGGCTTGAAGTATTCTATGAATTCCTTCACAATAAAGGAGGTGAAGTCTGCTGGAGGAAAAGGGAAGGGTGTGCCACAATCACTTCGTGCACTTGCTCGTGTTCTTTCTTGTACCACGCCTCAGGAGCTTAATAATCTGGTGATGGAGGCTGCGCAAACTGATGGTAGACTTAAAGAGATACAAGCACACAAGATGTTATCCTCATTATTCATCCAATTAATTGAGGAGCGCAATGCAACTATTATGTCATTAGATTCTTGCGATTCTTCATCCTTGTGTGAAAGACTTCCTGTTAGAAGACAAATGGCTCAAGATCTCCTACATGGCGAGCTTCGCATTCTCAAATCCGCTTCTACCTGGTTAGAGAACTACTGTTTGTCCTCAACTTGA 1350 0.4074 MAFGIGGGGRVPTLLRVGLSLHTVVFSFSSLPQFQPQVSPLYNFLPWLENKASSTISSSLSIANSSYGNSLFASKSIQTGDCILQVPYTVQLTPDNLPSEITHLISEDVGNIAKLAILLLIHKNLGQDSEWHPYISCLPPQAEMHNTIFWNGSELEMIRQSSVYWETIYQKSQIEKDFLTIKPVFESFCQSFGDFTCKDFMHACTQVGSRAWGSTKGLSLIPFADFLNHDGISEAIVMSDDDKQCSEVIADRDYVPGEQVFIRYGKFSNATLMLDFGFTIPYNIYDQVQIQFDIPQHDPLCDMKLELFKRYFVPPTKDMKGLKYSMNSFTIKEVKSAGGKGKGVPQSLRALARVLSCTTPQELNNLVMEAAQTDGRLKEIQAHKMLSSLFIQLIEERNATIMSLDSCDSSSLCERLPVRRQMAQDLLHGELRILKSASTWLENYCLSST* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0066 449 Pfam SET domain 70 265 IPR001214 GO:0005515
Mal1g0066 449 ProSiteProfiles SET domain profile. 58 265 IPR001214 GO:0005515
Mal1g0066 449 Pfam Rubisco LSMT substrate-binding 295 434 IPR015353 -
Mal1g0066 449 SUPERFAMILY SET domain 41 283 IPR046341 -
Mal1g0066 449 Gene3D - 281 444 IPR036464 -
Mal1g0066 449 PANTHER OS01G0976450 PROTEIN 40 443 - -
Mal1g0066 449 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 290 445 IPR036464 -
Mal1g0066 449 Gene3D set domain protein methyltransferase, domain 1 39 278 - -
Mal1g0066 449 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 40 443 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal1g0066 SET 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0066 K19199 - gmx:100818002 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0066 1 819291 825923 Mal1g0066 1 819291 825923 ECH