Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0052 ATGGGTGATGAAAGAGTTGGTCTCAGTGGTAATAAAGATAAGGGTGTTGCTGCTGTCCCTGAGGAAGATGCCAATTCTCCACCTCTTCCAGAAAGGGTTCAAGTAGGAGGATCACCTCTATACAAGGTAGAAAGGAAACTTGGGAAAGGTGGATTTGGCCAGGTTTTTGTTGGTCGCCGCGAGCGTGCGAATGCTCCCGGAGCTGTGGAGGTTGCTCTGAAATTTGAACATAGAAACAGTAAAGGTTGCAACTATGGCCCTCCTTATGAGTGGCAAGTATACAACACCCTTGGTGGTAGTCATGGAATACCTAAAGTACACTATAAAGGAAGACAAGGAGAATATTATGTGATGGTTATGGACATTCTTGGGCCAAGTCTGTGGGATGTTTGGAATACTTCAGGCCAGTCGATGTCTCCTGAAATGGTCTCATGTATAGCCGTTGAGTCATTATCAATACTTGAAAAGCTGCATGCCAAAGGTTATGTACATGGAGATGTAAAACCAGAGAACTTTTTACTAGGTCAGCCCAACACAGCACAGGAGAAGAAATTGTTTCTTGTTGATCTTGGTTTAGCAACAAAGTGGAAAGATTCGTCAAGTGGAAAGCATACTGAATACGATCAACGCCCCGACATGTTCAGAGGGACTGTTCGATACGCTAGCGTTCATGCTCATTTGGGAAGAACTGCCAGTAGAAGGGATGACCTTGAATCACTTGCATATACACTAATCTTCCTTCACAGGGGTCGATTGCCATGGCAAGGTTTTCAGGGTGATGGCAAATCATTCCTTGTTTGCAAAAAGAAAATGGGAACGTCTGCTGAGATGCTGTGCTGCTTTTGCCCTGCTCCTTTTAAGCAATTTCTCGAGACTGTGGTAAACATGAAGTTTGATGAAGAGCCTAACTATTCCAAGCTAATATCCTTGTTTGATGGTATGCTCGGACCTAATCCCGCATTAAGACCAATTAACACTGAAGGCGCTCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATGTTGAAGCAGATGATGATTCACAGCCTAAAAAAAAGGTTCGTTCAGGGATTCCTGCTTCGCAATGGATTTCAGTTTACAATGCTAGACAACCAATGAAACAAAGGTATCATTACAATGTGGCTGATGGAAGATTAGCACAGCATATTGAGAGAGGGATTGCAGATGACCTTCTTATTAGCTGTGTATCATGCTGTTCCAATCTATGGGCACTTATTATGGATGCTGGAACTAATTATTCCGCTCAAGTTTACAAATTATCACCATTATTTTTACACAAGGAATGGATCTTGGAACAATGGGATAAGAACTACTACATTACTTCTATTGCAGGGGCCAGTAATGGCAGCTCTGTTGTGGTGATGTCAAAAGGTACAAGGTATACTCAACAATCATACAAAGTAAGCGAATCTTTCCCCTACAAATGGATAAACAAGAAGTGGAAGGAAGGTTTTCACGTCACCTCAATGGGTACTGCTGGAAATCGCTGGGGTATTGTTATGTCTCGCAATGCTGGATTCAGTGATCAGGTGGTGGAACTTGATTTTCTGTATCCAAGTGAAGGCATCCATAAACGTTGGGATAATGGTTATAGAATTACAGCAACTGCAGCTACATTGGATCAATCTGCACTTATATTAAGCATCCCGAGGAATAGACCTGGCGATGAAACTCAGGAAACTCTGCGTACATCTCAATTTCCCAGCGCTCATGTTAAGGAAAAATGGTCAAAAAACCTTTATCTTGCCCATTTGTGCTATGGGCGCACAGTATGCTGA 1797 0.4274 MGDERVGLSGNKDKGVAAVPEEDANSPPLPERVQVGGSPLYKVERKLGKGGFGQVFVGRRERANAPGAVEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDILGPSLWDVWNTSGQSMSPEMVSCIAVESLSILEKLHAKGYVHGDVKPENFLLGQPNTAQEKKLFLVDLGLATKWKDSSSGKHTEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHRGRLPWQGFQGDGKSFLVCKKKMGTSAEMLCCFCPAPFKQFLETVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNVEADDDSQPKKKVRSGIPASQWISVYNARQPMKQRYHYNVADGRLAQHIERGIADDLLISCVSCCSNLWALIMDAGTNYSAQVYKLSPLFLHKEWILEQWDKNYYITSIAGASNGSSVVVMSKGTRYTQQSYKVSESFPYKWINKKWKEGFHVTSMGTAGNRWGIVMSRNAGFSDQVVELDFLYPSEGIHKRWDNGYRITATAATLDQSALILSIPRNRPGDETQETLRTSQFPSAHVKEKWSKNLYLAHLCYGRTVC* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0052 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Mal1g0052 598 MobiDBLite consensus disorder prediction 1 31 - -
Mal1g0052 598 PANTHER CASEIN KINASE I-LIKE PROTEIN 11 572 - -
Mal1g0052 598 ProSiteProfiles Protein kinase domain profile. 41 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0052 598 Pfam Protein kinase domain 41 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0052 598 CDD STKc_CK1 41 311 - -
Mal1g0052 598 PANTHER CASEIN KINASE-RELATED 11 572 - -
Mal1g0052 598 Gene3D Transferase(Phosphotransferase) domain 1 15 357 - -
Mal1g0052 598 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Mal1g0052 598 MobiDBLite consensus disorder prediction 337 352 - -
Mal1g0052 598 SMART serkin_6 41 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0052 598 SUPERFAMILY Protein kinase-like (PK-like) 41 319 IPR011009 -
Mal1g0052 598 MobiDBLite consensus disorder prediction 329 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0052 Mal-Chr1 622057 626752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0052 154 311 MAP Kinase Kinase Kinase AT5G50180 25.000 2.12e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mal1g0052 Pkinase 6.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0052 - - gmx:100819969 1095.11