Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0049 ATGGTATCGGCTACAATTAGGCGCATTGTGTCACCCTGTTGGAGGCCATCTATTGAGGGTGAAAATTCTGGCGATGCAAGTGGACGTTCGGAAGGTTTGTTGTGGTATAAAGATTTTGGAAGACATTCGGATGGTGATTTCTCAATGGCAGTTGTTCAAGCAAACAATTTGTTGGAGGATCAAAGTCAAGTTGAATCAGGACCTATGAGCTCAATTGAAGGAAGTCCTCGAGGTACTTTTGTTGGTGTATATGACGGGCATGGAGGTCCAGAAACTGCCCGCTTTGTCAATGAACGCCTATTTAAACATATCAAGAAGTTCACTACAGAAAATCAGGGAATGTCAGCTGATGTTATCACTAAAGCATTTTTGGCTACAGAAGAAGAATTTCTCGCTCTGGTAAAGAAGCAGTGGCAACACAAACCGCAGATAGCGTCAGTTGGATCTTGCTGTTTGGTAGGTGTAATATATAGTGGGGAGCTCTATATTGCAAATGCAGGAGACTCACGAGCAGTGTTAGGTAGACTGGACGAGGCTACAAAAGAGATTAAAGCGGTCCAACTATCCTATGAGCACAATGCTAGCCTGGAATCTGTAAGAGAGGAGCTACGCTCGTTGCATCCCAATGATCCACAGATCGTAGTGATGAAGCACACGGTCTGGCGCGTGAAGGGTCTCATTCAGATTTCAAGATCCATTGGTGACGCTTATCTAAAGAAGAAAGAGTTTAACCAAGCACCACTGTTAACAAAGTTTCGGCTCCAAGAACCCTTTGAAACGCCTATCCTCAAAGCTGAACCAACAATACAAGTACAGAAACTACAACCTTGTGATCAATTTCTTATATTTGCATCAGATGGATTATGGGAGCACTTGAGCAATCAAGAAGCAGTTGACATTGTCCAGAGCTGTCCACGCAATGGAGTAGCGAAGAAACTGATCAAAGCAGCGCTTTGTGAAGCTGCAAAGAAAAGAGAAATGAGATACTCGGACTTGAAAAAGATCGATCGTGGGGTACGGAGACATTTCCATGACGACATCACGGTTATAGTCGTGTATCTTGATTCGCATAATCCACGTGCTCCCGCCGTTTCAATTAAAGGAGGTGGTGATTTTGGCATTGGTATTGTAAATGGCTAG 1140 0.4377 MVSATIRRIVSPCWRPSIEGENSGDASGRSEGLLWYKDFGRHSDGDFSMAVVQANNLLEDQSQVESGPMSSIEGSPRGTFVGVYDGHGGPETARFVNERLFKHIKKFTTENQGMSADVITKAFLATEEEFLALVKKQWQHKPQIASVGSCCLVGVIYSGELYIANAGDSRAVLGRLDEATKEIKAVQLSYEHNASLESVREELRSLHPNDPQIVVMKHTVWRVKGLIQISRSIGDAYLKKKEFNQAPLLTKFRLQEPFETPILKAEPTIQVQKLQPCDQFLIFASDGLWEHLSNQEAVDIVQSCPRNGVAKKLIKAALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVYLDSHNPRAPAVSIKGGGDFGIGIVNG* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0049 379 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
Mal1g0049 379 CDD PP2Cc 47 354 IPR001932 -
Mal1g0049 379 ProSiteProfiles PPM-type phosphatase domain profile. 46 354 IPR001932 -
Mal1g0049 379 Pfam Protein phosphatase 2C 67 324 IPR001932 -
Mal1g0049 379 SMART PP2C_4 40 352 IPR001932 -
Mal1g0049 379 PANTHER ALPHABET, ISOFORM E-RELATED 8 371 - -
Mal1g0049 379 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 371 - -
Mal1g0049 379 SUPERFAMILY PP2C-like 58 356 IPR036457 -
Mal1g0049 379 Gene3D - 39 360 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0049 Mal-Chr1 601527 603883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0049 3 373 PP2C-type Phosphatase Gene Family AT3G12620 74.603 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0049 K01102 - gmx:100785413 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0049 1 601527 603883 Mal1g0049 1 601527 603883 ECH