Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0014 ATGACATTGATTGCAGCTGCGGGGTTCACAATCACGAGGGGCAATTCAAGATTGAAGTCTGAACTGAGCTTCACCGGGGGTGGACAGGGACAAGAATGTCTTTCTCGAATATCCGAAGATTATGCAGCAGCAGCTGGAAATGGAACTTTACATAGTAGTACTAGTACCTGGGGTGGAGGAGCTGATAATAATAACTCAAATTCCATAGTATTTTCTTCTTCTCAAACCCAAACTACTAATAGTAAGAAGCGTTCTAGTAGAACTGACAACAACGATGATCCCGACCTTCTTCTTCATTGCCTCAATGCCCTTGAGACTCAGTATAGTCTCCCACAAACTTCTCTGGAAATGGACCAGCTTATGCATAATATTCCCCAAGATTCCGTCCCTTGTAAAATCCGTGCCAAGCGTGGCTGTGCCACTCATCCCCGTAGTATTGCTGAACGGGAGAGAAGAACTAGGATAAGTGGCAAGTTGAAGAAATTGCAGGACCTTGTACCTAATATGGATAAGCAAACAAGTTATTCAGACATGCTGGATTTGGCCGTTCAACATATCAAAGGTCTTCAAACTCAAGTTCAGAAGCTTCACGAAGATCTTGAGAATTGCACTTGCGGATGCAAACAAAATACATAA 636 0.4308 MTLIAAAGFTITRGNSRLKSELSFTGGGQGQECLSRISEDYAAAAGNGTLHSSTSTWGGGADNNNSNSIVFSSSQTQTTNSKKRSSRTDNNDDPDLLLHCLNALETQYSLPQTSLEMDQLMHNIPQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQVQKLHEDLENCTCGCKQNT* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0014 211 CDD bHLH_AtbHLH_like 144 196 IPR045239 -
Mal1g0014 211 MobiDBLite consensus disorder prediction 53 94 - -
Mal1g0014 211 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 203 IPR036638 GO:0046983
Mal1g0014 211 Pfam Helix-loop-helix DNA-binding domain 144 190 IPR011598 GO:0046983
Mal1g0014 211 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 12 204 - -
Mal1g0014 211 PANTHER TRANSCRIPTION FACTOR BHLH129 12 204 - -
Mal1g0014 211 MobiDBLite consensus disorder prediction 53 84 - -
Mal1g0014 211 SMART finulus 145 195 IPR011598 GO:0046983
Mal1g0014 211 Gene3D - 140 209 IPR036638 GO:0046983
Mal1g0014 211 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 189 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0014 Mal-Chr1 244274 246749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0014 13 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 57.143 2.33e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g0014 HLH 4.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0014 - - mtr:MTR_1g116790 348.206