Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0003 ATGGACAAGTTGTGGAGCTTCTCGTCAAGAAGCAGTAATAATGTTGACATCGGAAGGCAACAATGTGAAGAAGAAGAAAAGGACAATCTCCACGAGCAATTAGATGATCTAATCCCTCTCTCACAGGTTTTGGATGATGTGGATGATTTTCTCAATAGCGTAGAAACTCCAAATTCCATCTCTAGGGAAGAAGTTCCAAATTGTGTGGTCGTGCTCCACAAATTGTTAGAATCTATGATGGATAAATACAATAAAGGGTGTAGAGGTGGAAGAAGCAAGTTCGGGCAAGATCTAAATGACGACAAATCTTTTCTAGATGCATTGGATCGCATCCTCAAGTTGTCTACCACCTTGAGTTTGAGTGATTTCTTCTTAGACAAAACAAACTTCGTCCTAGAAAAAGCAATGTTTATTTTAGAGAATGACCTTTGTGCTATTCTACAACACTCCAAATCAAAAACTTGCAGACCAACACCACCACCCAAGAAATCCTCCTCCTTTGGTTCTCTTCAACTTCAATTTCAACTTCAAGACGAAAGGGAATCTCTAAGGACCAACAACCTAGTTGACGAGGATGACGAGGGTGGTGACTTATTACCAAATTTCTCCGCAAATGAAATTTTTGTTATGAACAAGATTGCCACTGCCATGGTTAGCGCGGGCTATCATACAGAGTGTTGCATGACCTTTACTAATTTCAGGCGAAATGCTTTTAAAAACGTGTTGCGAAAATTAGGATACACATGTGCAAGGATGGAGGTTGTTTATAAAATGCAATGGGAATCGCTAGAAGGAGAAATCACAACATGGAACAAAGTATTTCGGCATTGCATTACCGTGCTCTTCAACACTGAACGAAAGTTATACGATTCAATATTCTCAAATCAACCCTCTATTTCTCGGGGCATTTTTTGTGATCTTGCACGAGTTGTCATCATTAATTTTCTCAATTTTGCTCAAGCGGTAGTTTTAACCAAGCCATCACCGGAGAAACTGTTCAAGTTTCTAGATATGTACGAGACCTTGAGGGATGACGTTGAGCCTGTCATTATACTCATTAATGATGATGGTTTAGAGCGGTGTGCCAAGGATTTGACATATGAGATGGCTGTGACAAAGCATGGAATCATAGAGGCAGTCATTACGATGTTCTATGATTTGGAAAACTCCATTAAGGGTGATAATGAAAGGATTCCAGTCCCATATGGGGCGATTCATCCATTGACTCGTTATGTCATGAATTATCTTAAATATGCATGTGAATACAAAGTGACGTTAGAGCAAGTGTTCTGTCAATATTGTACAAATCATTGTCTTACAAATGTAGATCACCATTATGTCGATAATAATAAGGGTACATCTACATCCACCACAAATATTCAAAATGAAGAAAACAATAAAACAGAAGATAAAAAATTAGACAGGGTGCCCAACAAATCACCTTTTGTGGTTCAATTGATGACAATTGTAGACCTTTTAGATGAAAATACTGAAAGGAAGTCAAAGCTTTATAAGGATTTAGCTTTACGTTGTGTTTTTCTAATGAACAATGGGAGATACATAGTGCAGAAGATTAAAGGGTGTGTTGATCTTCATGAGTCCATGGGCGACAACTGGTGTAGGAGGAGGCAAACAAGTTTGAAGTTTCACCATAAGAGTTATCAGAGAGAGACTTGGACTAAGGTGTTGCAGTGCCTTAACCCAGATGGCCTTCATCAACAAGGGAACAAGGTGTCTAAGCAGGTTTTGAGAGAGAGGTTTAAGTGTTTCAATTCCATGTTTGAAGATATCCACAAGACGCAGAGCAGTTGGATGGTTAGCGATGAACAACTTCAATCAGAGCTAAGAGTTTCGATATCAGCCTTGGTCATACCTGCATATCGCTCCTTTATGGGAAGATTTAAACATCATCTAGAATCAGGTAGACATATTGATAAATACATAAAGTATCATCCTGATGACATTGAGACATTGATTGATGATTTTTTTGTTGGAAATGCTACGTCCATGCCTCGAAGGAGGACATGA 2028 0.3881 MDKLWSFSSRSSNNVDIGRQQCEEEEKDNLHEQLDDLIPLSQVLDDVDDFLNSVETPNSISREEVPNCVVVLHKLLESMMDKYNKGCRGGRSKFGQDLNDDKSFLDALDRILKLSTTLSLSDFFLDKTNFVLEKAMFILENDLCAILQHSKSKTCRPTPPPKKSSSFGSLQLQFQLQDERESLRTNNLVDEDDEGGDLLPNFSANEIFVMNKIATAMVSAGYHTECCMTFTNFRRNAFKNVLRKLGYTCARMEVVYKMQWESLEGEITTWNKVFRHCITVLFNTERKLYDSIFSNQPSISRGIFCDLARVVIINFLNFAQAVVLTKPSPEKLFKFLDMYETLRDDVEPVIILINDDGLERCAKDLTYEMAVTKHGIIEAVITMFYDLENSIKGDNERIPVPYGAIHPLTRYVMNYLKYACEYKVTLEQVFCQYCTNHCLTNVDHHYVDNNKGTSTSTTNIQNEENNKTEDKKLDRVPNKSPFVVQLMTIVDLLDENTERKSKLYKDLALRCVFLMNNGRYIVQKIKGCVDLHESMGDNWCRRRQTSLKFHHKSYQRETWTKVLQCLNPDGLHQQGNKVSKQVLRERFKCFNSMFEDIHKTQSSWMVSDEQLQSELRVSISALVIPAYRSFMGRFKHHLESGRHIDKYIKYHPDDIETLIDDFFVGNATSMPRRRT* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0003 675 Gene3D Exocyst complex component Exo70 92 673 - -
Mal1g0003 675 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 27 666 - -
Mal1g0003 675 PANTHER EXOCYST COMPLEX PROTEIN EXO70 27 666 IPR004140 GO:0000145|GO:0006887
Mal1g0003 675 MobiDBLite consensus disorder prediction 452 474 - -
Mal1g0003 675 Pfam Exo70 exocyst complex subunit 269 661 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mal1g0003 675 SUPERFAMILY Cullin repeat-like 95 663 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0003 Mal-Chr1 54130 56157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0003 40 674 EXO70 exocyst subunit family AT5G13150 44.272 8.99e-175 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0003 K07195 - mtr:MTR_1g117090 1153.66