Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3395 ATGGTGAAGTTCTTGAAGCCGAACAAGGCTGTGATCGTGCTGCAAGGGCGGTACGCAGGGCGGAAGGCGGTGATCGTGCGCACATTTGATGAGGGGACTCGTGATCGCGCCTACGGACACTGCCTGGTTGCAGGGATTAAGAAGTACCCGAGCAAGGTGATTAAGAAGGACTCTGCCAAGAAGACGGCGAAGAAATCGAGGGTGAAGGCGTTCGTGAAGCTCGTGAACTACCAGCACCTGATGCCCACTCGCTACACCCTTGATGTAGATCTGAAGGACGTTGTTGTTCCTGATTCCCTCCAATCGAAGGACAAGAAGGTCGCTGCTCTCAAAGAGACCAAGAAGCGCTTGGAGGAAAGGTTCAAAACCGGTAAAAACAGGTGGTTCTTCACCAAACTTGGTTTTTGA 408 0.5221 MVKFLKPNKAVIVLQGRYAGRKAVIVRTFDEGTRDRAYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVVPDSLQSKDKKVAALKETKKRLEERFKTGKNRWFFTKLGF* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3395 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lja6g3395 135 SMART kow_9 4 31 IPR005824 -
Lja6g3395 135 SUPERFAMILY Translation proteins SH3-like domain 2 133 IPR008991 -
Lja6g3395 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 135 - -
Lja6g3395 135 CDD KOW_RPL27 6 88 IPR041991 -
Lja6g3395 135 Coils Coil 100 127 - -
Lja6g3395 135 Gene3D - 1 135 IPR038655 -
Lja6g3395 135 Pfam Ribosomal L27e protein family 52 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3395 Lja-Chr6 62065562 62066375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3395 1 135 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 82.222 2.79e-80 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3395 K02901 - mnt:21400722 236.113