Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3369 ATGTTGCTGGAAGAATTGACTGCTAATATACGTGCTGCCGCTGAGGAAAATGCTTCAAGAGGTGAAGGAATCGCACTGGGGATCCGTCGCCGCTGCCGTCGCCGCGGAGCTGCTTGTAAAAGTGATCGGATAAGGATCTGCACAAATCAAAATTGCAGGACAATGACAACTCCCTTGTGGCGCAGGGGACCTCTAGGACCACAGACATTGTGCAATGCATGTGGCATTTATTATAGGAAGAGGGAGCGTGGCCTCTCGGTTGTTGTACCTGATGCTGCTTCCTCCAGCAATGGAGTCCCTGCTAATAATGACGCTTCTTCCAGTTCTGTCCCAAGCTCCCCTGCTGTACCTGTGAAAGTGGAGCCTGCTGCATCTGTGAAAATGGAGCCTGCTGCATCTGTGAAAGTGGAGCCTGATGCATCTGTGAAAGTGGAGCCTGCTGTATCTGTGAAAATGGAGCCTGCTGCTGTATCTGTGAAAGTGGAGCCATAA 492 0.5102 MLLEELTANIRAAAEENASRGEGIALGIRRRCRRRGAACKSDRIRICTNQNCRTMTTPLWRRGPLGPQTLCNACGIYYRKRERGLSVVVPDAASSSNGVPANNDASSSSVPSSPAVPVKVEPAASVKMEPAASVKVEPDASVKVEPAVSVKMEPAAVSVKVEP* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3369 163 PANTHER GATA TRANSCRIPTION FACTOR 17-RELATED 32 95 - -
Lja6g3369 163 ProSiteProfiles GATA-type zinc finger domain profile. 51 97 IPR000679 GO:0006355|GO:0043565
Lja6g3369 163 Pfam GATA zinc finger 50 82 IPR000679 GO:0006355|GO:0043565
Lja6g3369 163 MobiDBLite consensus disorder prediction 91 114 - -
Lja6g3369 163 Gene3D - 43 109 IPR013088 GO:0006355|GO:0008270
Lja6g3369 163 MobiDBLite consensus disorder prediction 91 120 - -
Lja6g3369 163 PANTHER GATA TRANSCRIPTION FACTOR 32 95 - -
Lja6g3369 163 CDD ZnF_GATA 46 81 IPR000679 GO:0006355|GO:0043565
Lja6g3369 163 SMART GATA_3 43 95 IPR000679 GO:0006355|GO:0043565
Lja6g3369 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 43 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3369 Lja-Chr6 61885799 61886924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3369 44 91 C2C2-Gata Transcription Factor Family AT3G20750 52.830 2.05e-15 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lja6g3369 GATA 1.6e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3369 - - rcu:8267540 76.6405