Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3329 ATGGCGTCGTCGAAGGTGGATCTGGAACAACACTGTTCTCTTTCAGTTTCAGGTGACGAGATTTGGGAAGACATCGTTGGTGCCACTGATCAACACATCACGCTCGAGGATTTCTTAACCAAGTCTGTCCCTGTCGACACAGATGACGCCACCACCCACAACAAGAACGAAATGTATCTTCCTCAATCGGCCAACGGGCATGAATCAGCCAAGAAATTAGTCCCACATGGAAGGGGAAAGAGGAGGGTTGTGGAGGAACAGCCACTTGATAAGGCCACTCTTCAGAAACAGAGGAGGATGATCAAGAACAGAGAATCTGCTGCTAGGTCCAGAGAACGCAAGCAGGCTTACACACTTGAGCTAGAGGCTCTGGTTACTCATCTGGAGGAAGAGAATGCACAATTGTTGAGGGAAGAGGCTGATAAGAACAGACTGAGGTTTAAGCAGCTGATGGAGTGCCTCATTCCAGTTGTGGAGAAGCGTAAACCAAGACAAATGCTTAGGAGGGTGAATTCAGTGCAATGGTGA 528 0.4848 MASSKVDLEQHCSLSVSGDEIWEDIVGATDQHITLEDFLTKSVPVDTDDATTHNKNEMYLPQSANGHESAKKLVPHGRGKRRVVEEQPLDKATLQKQRRMIKNRESAARSRERKQAYTLELEALVTHLEEENAQLLREEADKNRLRFKQLMECLIPVVEKRKPRQMLRRVNSVQW* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3329 175 Coils Coil 114 148 - -
Lja6g3329 175 SMART brlzneu 91 153 IPR004827 GO:0003700|GO:0006355
Lja6g3329 175 Pfam bZIP transcription factor 92 140 IPR004827 GO:0003700|GO:0006355
Lja6g3329 175 CDD bZIP_plant_BZIP46 95 137 - -
Lja6g3329 175 PANTHER OS05G0437700 PROTEIN 17 174 - -
Lja6g3329 175 Gene3D - 94 149 - -
Lja6g3329 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 93 138 IPR004827 GO:0003700|GO:0006355
Lja6g3329 175 SUPERFAMILY Leucine zipper domain 95 140 IPR046347 GO:0003700|GO:0006355
Lja6g3329 175 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 98 113 IPR004827 GO:0003700|GO:0006355
Lja6g3329 175 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 174 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3329 Lja-Chr6 61525422 61527247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3329 17 175 bZIP Transcription Factor Family AT5G44080 42.347 5.63e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja6g3329 bZIP_1 1.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3329 K14432 - twl:119982647 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3329 6 61525422 61527247 Lja6g3329 6 61525422 61527247 ECH