Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3328 ATGAGTGGAACTAGTGGTAACATAGAATTTGAGATATTACACAGAAAATGCATCAAACCCTCCACACCCACACTATCACACTTGAAAACCTTCAAACTCTCACTGCTTGACCAGCTTTCACCTGACATCCATGGCAACATCACCTTCTTCTTCAACAATTCTCATTCTCATTCTCAATTCTCCACCAACTCCCAACTCCTTCAAACCTCCCTCTCCCAAACTCTCACCCTTTTCTACCCTCTCGCCGGACGCCTCCACCACCCTGCCACCGCCATCAACTGCAACGACCACGGTGCCTTCTTTATCGAAGCTCAAACCACCACCACCCTCTCCGACCTCCTCACCAACCCCCATTTCAACACCCTTGAATCCCTCATCCCCTCCACCGATGAAGAAACCGTCGCAATGTCCAACGGCTCCATGCTCCTTATCCGCTTCACCTTGTTCGGTTGCGGCGGCACCGCCGTCTCCATATCCCTCACCCACAAGATAGCCGATTTCTCCGCCCTCATCACGCTACTCAAAACCTGGACCGCCGTGTGCGGCGGAGCCACCGAGCTACCTGCCCCTGAACTCACCGCCGGCGCCGTCTTATTCCCTCAGAGGGAGATTCCGGGCATGTCAGCCTCCGTGATCACCGTCGCCGGGAAATTCGCCGCGAGAAGGTTCATTTTCAACGCATCCAAGGTTGACGAGCTGAAAAATAGAGTCAAAGTCGCACTCCAAAGCGCCGTCGTTGGAGGCGGTGCTGCTTTTCACGCGTCGAGGGTGGAGGTGGTGCTCGCGCTCATTTGGAGGTGTGCTCTGTTAGCAGCTTCCTGCTCCTCCAAAACGGTGTCATCGTTCAGGCCTTCTGCTCTGTTCCAGGCAGTGAACCTCCGTCCCCGGATGGAGCCGGCGGTTTCCGACACCGCTGTGGGGAACTTCGTGTGGCCGTTCGCGGTGACGGTGGAGGAGGAGAGTCACTTGGAGTTGCATGAGATGGTGTGGAGAATGAGGGAAGCTATGAAGGAGTTTCTTGAGACCAAGGCAGGGAGGTTCAGAGAGGAAGGTGGTTTTGAAGTGGTGATGGAGTGTCTGAAAGAGAGGGCTCTGCTTTTGAATAGGAACAACAAGGACATTGTTGTTTATAAGTGTACCAGTTGGTGTAAGTTTCCTCTGCTTGGACTAGATTTTGGGTGGGGGAAACCTGTGTGGAGTTGCAGTGTGAATAATTTGGTGAGTAACACCATTGCATTGATGGATACCAAGGATGGTGGAGTTGAAGCTTGTGTCACACTGAGTGAGGAAGAGATGGACTTATTTCAACAAGATGAGCACCTGCTACAATATGCTCTGCTTAATCCTGGTGTTATAATCTGA 1362 0.5235 MSGTSGNIEFEILHRKCIKPSTPTLSHLKTFKLSLLDQLSPDIHGNITFFFNNSHSHSQFSTNSQLLQTSLSQTLTLFYPLAGRLHHPATAINCNDHGAFFIEAQTTTTLSDLLTNPHFNTLESLIPSTDEETVAMSNGSMLLIRFTLFGCGGTAVSISLTHKIADFSALITLLKTWTAVCGGATELPAPELTAGAVLFPQREIPGMSASVITVAGKFAARRFIFNASKVDELKNRVKVALQSAVVGGGAAFHASRVEVVLALIWRCALLAASCSSKTVSSFRPSALFQAVNLRPRMEPAVSDTAVGNFVWPFAVTVEEESHLELHEMVWRMREAMKEFLETKAGRFREEGGFEVVMECLKERALLLNRNNKDIVVYKCTSWCKFPLLGLDFGWGKPVWSCSVNNLVSNTIALMDTKDGGVEACVTLSEEEMDLFQQDEHLLQYALLNPGVII* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3328 453 Gene3D - 216 445 IPR023213 -
Lja6g3328 453 Pfam Transferase family 11 440 - -
Lja6g3328 453 Gene3D - 7 206 IPR023213 -
Lja6g3328 453 PANTHER VINORINE SYNTHASE-RELATED 7 452 - -
Lja6g3328 453 PANTHER F21J9.9 7 452 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3328 8 437 Monolignol Biosynthesis Gene Families AT5G48930 22.876 2.44e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3328 - - mtr:MTR_2g007880 536.184