Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3324 ATGATGAAGGGTATATGCAATGTAGTGCAAGGTTTGAAGCCTGCGTTGTTGATGGTGTTGGTGCAGATAGCATTTGCTGGTGTCAATGTTCTCTACAAGCTTGCCGTTAACAATGGCATGAGTTTGAGGGTGGTTGTTGCCTACCGCTTTATCTTCGCAACTGCTTTCATAGCTCCTCTTGCTTTCATTCTTGAAAGGAAGAAGAGGACAAAGATGACTTGGACAATACTGTTTCAATCATTTCTCTGCGGTTTGTTTGGAGGATCATTAGCTCAAAACTTCTACTTAGAGGCTTTGGCTTTAACATCAGCGACATTTGCATCGGCCATGTCCAACCTAGTACCAGCCATAACCTTTATCATGGCCGTTTCCTTCGGTTTGGAAAAATTAAATTTGAGAACGGCAGCAGGGAAGGCTAAGATAGTAGGCACATTAACTGGAATTGGCGGGGCAATGGTACTCACTTTTGTTAAAGGCATTGATATCAAAATGGGTTCCTTTCACATTAACCTTTTACATTATCCTAACGGGGCACAACACTCACAAGCTAGCACCACCGGTGGTAAGACTCTCTTGGGTTCCCTATGTGCCCTGGCTAGTGGCATCTCTTATGCACTCTGGCTTATTATTCAGACAAAGATGAGTGAAAAATACCCAACTCATTACTCAAGCACCGCGTTGATGTCATTTTGGGGGTCAATCATATCTGTTGTGTTTGCTCTTTGTGTTGAGAGGGATTGGAGTCAGTGGAGGTTAGGTTGGAATGTTAGGCTTCTAACGGTTGCTTATTCGGGTATGGTGGTCTCTGGAGCAATGGTGGTTGTGATTTCATGGTGTGTACGGATGAGAGGCCCTTTATTCGTCTCAGTTTTTAGCCCTCTAATGCTAGTCATGGTCGCCATTGAAAAACAGACCAAAACTCACTTGGAGGGTGCTCTTCATGTCATTTTTCTGTGGCCTATTTGGGTGTGGAACTTGACATTTGGCCCTTCCACATTAACATCCTGCATAAAAAGGATACATGAAAACACACAAATTAAAATGGGAGATATAATGAGGAAAATGCAAGGGTTGAAGCCAGCCCTGATGATGTTGATGGTGCAGATTGCTTTTTCTACAATGAATGTGTTGTACAAATTTGCCATAAACGATGGAGTAAGCGTCAGAGTCATCACTGCTTACCGTCTCATTTTCGCCACTGCTTGCACCGTTCCACTTGCTCTTATTCTTGAAAGGAAAAACAGACCAAAACTGACTTGGAGGGTTTTATTTCAAAACCTTTTCTATGAGGCCTTGGCTTTAATATCAGCAACGTTTGCCTCCGCAATCTACAATCTTGTTCCAGCCATCACGTTTGTCATGGCCATCTCCTTCGGTTTGGAAAGGTTAAATTTGAGGGCTGCATCAGGAAAAGCTAAGGTGTTAGGAACTCTAATTGGAATTGGTGGGGCTATGGTGTTGACCTTTATCAAAGGGAAAGAGATTCATATCTGGCCCTTCCACATCAACCTATTGGATCCACATCAGCACCAAAATGGCCACGTAGCGTCACATTCTGATGACTCTGGTATTAACTTGCTTGGTGTTCTATGTGCCATTGCAAGTTGCTTCTCTTTTGCTATGTGGTTCATCATTCAGGCCAAGATGAGCAAAGAATACCCAACTCATTACTCAAGCACAGCTTTGATGTCTACAATGGGAGCAATACAAGCCACTGTTTTTGGACTCTGTGTTGAAAGGGATTGGAGTCAATGGAAGTTGGGTTGGAATATCAGGCTACTAGCTGTGGCTTACTCGGGAATTGTGGCCTCTGGAGTAGTAGTTATTATCACTGCGTGGTGCATACAGATGAGGGGACCTCTATTTGCGTCTGTTTTCAACCCTCTAATGCTAGTGATTGTGGCGGTTACCGCTTCTTTGATGTTGGATGAGAAATTATATTTAGGAAGTTTGCTTGGAGCAGTGTTAATTGTGTGTGGCTTGTACATGGTTTTGTGGGGTAAGAGTAAAGAGATGAAAAAGATAGCTATGTTGGTGCCATCAGAAATCACCCAAGAAGCTGAAGCTATAGAAGTTGTTGTGAGTTCTACACCAGCAGATAGTTATAAATGTGACCAAAACAATCACAGCCAAACAACTACTACTACCACCACCAGAAATGAAGTACAAGATCATGAGGATTTGTCCAAAAAATGGGGAAACTAA 2205 0.4286 MMKGICNVVQGLKPALLMVLVQIAFAGVNVLYKLAVNNGMSLRVVVAYRFIFATAFIAPLAFILERKKRTKMTWTILFQSFLCGLFGGSLAQNFYLEALALTSATFASAMSNLVPAITFIMAVSFGLEKLNLRTAAGKAKIVGTLTGIGGAMVLTFVKGIDIKMGSFHINLLHYPNGAQHSQASTTGGKTLLGSLCALASGISYALWLIIQTKMSEKYPTHYSSTALMSFWGSIISVVFALCVERDWSQWRLGWNVRLLTVAYSGMVVSGAMVVVISWCVRMRGPLFVSVFSPLMLVMVAIEKQTKTHLEGALHVIFLWPIWVWNLTFGPSTLTSCIKRIHENTQIKMGDIMRKMQGLKPALMMLMVQIAFSTMNVLYKFAINDGVSVRVITAYRLIFATACTVPLALILERKNRPKLTWRVLFQNLFYEALALISATFASAIYNLVPAITFVMAISFGLERLNLRAASGKAKVLGTLIGIGGAMVLTFIKGKEIHIWPFHINLLDPHQHQNGHVASHSDDSGINLLGVLCAIASCFSFAMWFIIQAKMSKEYPTHYSSTALMSTMGAIQATVFGLCVERDWSQWKLGWNIRLLAVAYSGIVASGVVVIITAWCIQMRGPLFASVFNPLMLVIVAVTASLMLDEKLYLGSLLGAVLIVCGLYMVLWGKSKEMKKIAMLVPSEITQEAEAIEVVVSSTPADSYKCDQNNHSQTTTTTTTRNEVQDHEDLSKKWGN* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3324 734 MobiDBLite consensus disorder prediction 720 734 - -
Lja6g3324 734 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 143 - -
Lja6g3324 734 MobiDBLite consensus disorder prediction 703 719 - -
Lja6g3324 734 MobiDBLite consensus disorder prediction 703 734 - -
Lja6g3324 734 Pfam EamA-like transporter family 359 488 IPR000620 GO:0016020|GO:0016021
Lja6g3324 734 Pfam EamA-like transporter family 527 665 IPR000620 GO:0016020|GO:0016021
Lja6g3324 734 Pfam EamA-like transporter family 13 138 IPR000620 GO:0016020|GO:0016021
Lja6g3324 734 PANTHER WAT1-RELATED PROTEIN 359 701 - -
Lja6g3324 734 SUPERFAMILY Multidrug resistance efflux transporter EmrE 585 670 - -
Lja6g3324 734 PANTHER WAT1-RELATED PROTEIN 13 305 - -
Lja6g3324 734 SUPERFAMILY Multidrug resistance efflux transporter EmrE 394 490 - -
Lja6g3324 734 PANTHER WAT1-RELATED PROTEIN 359 701 IPR030184 GO:0016021|GO:0022857
Lja6g3324 734 PANTHER WAT1-RELATED PROTEIN 13 305 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3324 Lja-Chr6 61437853 61481330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3324 358 721 Nodulin-like Gene Family AT1G25270 39.257 5.48e-88 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3324 - - fve:101300394 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4085 4 74054154 74063226 Lja6g3324 6 61437853 61481330 PCT