Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3319 ATGGCAGCAGAAACACAACCTTCAAAAGTCTTCAACATAGACGTTGAAGGACAATTAGCACATGCGGAGGAGGACGGTGGCGATGCTCTGAGCCACTCTGCTCATGACTACACTCAAAGAGCACAGTGGCTCAGAGCGGCCGTCCTGGGCGCCAATGATGGCTTGCTCTCAACTGCTTCCCTCATGATGGGTGTTGGAGCGGTTAAGAAAGATGTTAGGACCATGATCCTAACGGGGATTGCCGGGTTAGTTGCTGGCGCGTGCAGCATGGCCATTGGAGAGTTTGTTTCTGTTTACTCCCAGTATGATATTGAGCTGGCCCAGATGAAAAGAGAAGGTAATACTCAAAATAAGGACAAGTTGCCGAATCCTTATTACGCCGCCTTGGCTTCTGCTTTAGCTTTTGCCGTAGGTGCCGGCGTGCCGCTGCTCGCTGCAGCGTTTATCACGGAATATAAGGTGAGGATTGGGGTGGTGGTGGCTGCTGTCACCCTTGCCTTGGTGGTTTTTGGAGGGTTGAGTGCTTTTCTTGGGAAGTCACCGTTGGTGAAATCCTCTTTGAGGGTTTTGTTTGGAGGGTGGCTGGCCATGGCGGTTACTTTTGGATTAACCAAACTTGTGGGTGATCTTGGAATTTGA 639 0.507 MAAETQPSKVFNIDVEGQLAHAEEDGGDALSHSAHDYTQRAQWLRAAVLGANDGLLSTASLMMGVGAVKKDVRTMILTGIAGLVAGACSMAIGEFVSVYSQYDIELAQMKREGNTQNKDKLPNPYYAALASALAFAVGAGVPLLAAAFITEYKVRIGVVVAAVTLALVVFGGLSAFLGKSPLVKSSLRVLFGGWLAMAVTFGLTKLVGDLGI* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3319 212 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 4 208 - -
Lja6g3319 212 Pfam VIT family 44 116 IPR008217 GO:0005384|GO:0030026
Lja6g3319 212 Pfam VIT family 109 204 IPR008217 GO:0005384|GO:0030026
Lja6g3319 212 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 4 208 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3319 Lja-Chr6 61407893 61408973 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3319 32 212 Nodulin-like Gene Family AT3G43660 75.824 1.26e-95 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3319 K22736 - gmx:100811713 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3319 6 61407893 61408973 Lja6g3319 6 61407893 61408973 ECH