Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3314 ATGGCTTCCTGTGATAAGAGAACAAATGAAATCTCCCCTAACCATGTTGAGATTCCTGTCTACGCAAACGGTGTCGAGCCAAAAGCAAGTGCGGAGGTTGAAGAGAGCAACATTGACTTCTGTCAGAGGGCACAGTGGCTCCGTGCAGCTGTTTTGGGAGCCAATGACGGGTTGGTCTCTGTTGCATCCTTGATTATGGGTGTCGGAGCTGTTAAGCAAAACATCAGCGCCATGCTTCTTGCTGGCCTTGCAGGGACAATTGCTGGGGCTTGTAGCATGGCGATTGGAGAGTATGTCTCAGTGTCCACACAGTATGACATAGAGCTGGCTCAAATTGAAAGAGAGAAAGAAATTGATATCGCTAGCGCAGGAGAAGAAGCTCGGAAGAAGAAGCTGCCAAATCCATATCTAGCTGCTCTAGTATCATTTATTGCATTTTTTGTGGGTGCTGTGGTGCCACTGCTAGCAGCTGCATTTATAAGTGACCATAAGATTCGGCTGGCCATTGTTGCGGTTGTGGCTAGTCTTGCAATGTTGGTATTTGGAGGGGTAGGTGCAGTGCTTGGAAGAACTCCGGTAGGGAAATCCTGTCTCAGAGTGCTGATTGGAGGTTGGATGGCCATGACTGTAACATTTGGCCTGACCAAGTTATTTGGCTTTCTGCACTTTGAAAGTCATTAG 681 0.4772 MASCDKRTNEISPNHVEIPVYANGVEPKASAEVEESNIDFCQRAQWLRAAVLGANDGLVSVASLIMGVGAVKQNISAMLLAGLAGTIAGACSMAIGEYVSVSTQYDIELAQIEREKEIDIASAGEEARKKKLPNPYLAALVSFIAFFVGAVVPLLAAAFISDHKIRLAIVAVVASLAMLVFGGVGAVLGRTPVGKSCLRVLIGGWMAMTVTFGLTKLFGFLHFESH* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3314 226 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 5 220 IPR008217 GO:0005384|GO:0030026
Lja6g3314 226 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 5 220 - -
Lja6g3314 226 Pfam VIT family 129 215 IPR008217 GO:0005384|GO:0030026
Lja6g3314 226 Pfam VIT family 47 118 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3314 Lja-Chr6 61370294 61371428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3314 34 219 Nodulin-like Gene Family AT3G43660 59.140 9.35e-79 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3314 K22736 - gmx:100817158 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3314 6 61370294 61371428 Lja6g3314 6 61370294 61371428 ECH