Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3298 ATGAGTCAGGTTTTCACAGACGAGGTTGTGGCAAGAGCCATGGAGGACACAGGAAGCGCGCCTTCTTCACGCAGACATCATGGTTTGCCACACATTCATAAGGTGGGAACTGCTCCTAAGCAGACACTTTACCTAGAGATCAAACATTCTGTTAAGGAGACCTTCTTCTTTGACGACCCCTTAAGCCAATTTAAGGGCCAAAGCAGGAAAAGAAAGCTTGTTTTGGGCATGCAATCTGTCTTCCCCATTGTTGAATGGGGAAGAGATTACAATCTTCAAAAGTTCAAGGGTGATTTCATCGCTGGACTCACCATTGCAAGTCTATGTATTCCTCAGGACATTGCATACGCAAAGCTTGCAAATTTGAACCCTGAGCATGCACTGTACACAAGCTTTGTGGCTCCTCTTGTCTATGCATTCATGGGAACCTCCAGAGATATTGCCATAGGACCTGTAGCCGTGGTGTCCCTCTTGCTTGGGACTATGCTTACCGATGAGATTGCCGACTCTAAAAACCCTGACTACCTACGTCTTGCATATACTGCCACCTTCTTCGCAGGAATCACTCAATTGGCACTAGGATTTTTCAGGCTTGGTTTCTTGATTGACTTCCTATCTCATGCTGCCATTGTGGGATTCATGGGTGGAGCTGCCATCACTATTGCACTGCAACAGCTTAAAGGTCTACTAGGCTTAAAAACTTTCACAAAGAAAACTGATATTGTTTCTGTTATGCGCTCGGTTTGGAAACCAGTGGAACATGGGTGGAATTGGGAGACTATAGTCATTGGAATGTCATTCTTGGTCTTCATTCTTATAACAAATTATATTGCCAAAAAGAATAAGAAACTCTTTTGGGTGGCCGCAATCGCTCCTATGATCTCTGTTGTAGTGTCTACCTTTTGTGTGTACATTACCAGGGCTGACAAGAAAGGAGTGGCGATTGTGAAACATATAAAAAAAGGTGTGAATCCTGCATCTGCTAGTGAAATATTTTTCAGTGGAGAATATTTTGGTGCTGGTGTTAAGATTGGTGTGGTATCTGGTATGGTAGCACTCACGGAAGCTGTAGCGATTGCGAGAACATTTGCTGCCATGAAAGACTATTCAATCGATGGTAATAAAGAAATGGTGGCAATGGGAACAATGAACATTGTTGGTTCCTTGACATCTTCTTATGTGGCTACAGGGTCTTTTTCGCGCTCAGCAGTGAACTACATGGCTGGTTGTAAAACTGCTGTATCAAACATTGTTATGTCCATGGTCTTATTACTAACTCTGCTAGTTATCACACCTCTATTTAAGTACACTCCAAATGCTGTCCTCGCTTCAATTATCATAGCAGCTGTGATGAACCTGGTTGACGTTCAAGCAGCTATTCTTCTGTGGAAGATTGACAAATTCGACTTTGTGGCTTGCATGGGAGCCTTCTTTGGTGTGATCTTCAAAAGTGTTGAGATTGGCCTTCTTATCGCGGTGGCAATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCCAAGGACTGCAATACTTGGGAAGCTTTCAGGGACTAAAGTTTACAGGAATATCCTTCAATATCCCAAAGCAACCCAGATTCCTGGCATGTTGATTATCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGACAGAATTTTGAAGTGGGTGACTGATGAAGAGGTCCAAAGGACAGCGAGCGAATTTCCCAGCATACAGTCTCTCATTGTTGAAATGTCACCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTGGAAGATTTATTTAAGAGCCTTAAGAAAAGAGAAGTGCAGCTTCTCCTGGCAAACCCGGGGCCAATTGTGATAGAGAAGCTCCATGCCTCCAAGTTATCGGACATAATTGGGGAAGATAAAATATTTTCATCAGTGGATGATGCCGTTGCAACTTTTGGTCCAAAGGGTGAAGTAAAGTAA 1971 0.4302 MSQVFTDEVVARAMEDTGSAPSSRRHHGLPHIHKVGTAPKQTLYLEIKHSVKETFFFDDPLSQFKGQSRKRKLVLGMQSVFPIVEWGRDYNLQKFKGDFIAGLTIASLCIPQDIAYAKLANLNPEHALYTSFVAPLVYAFMGTSRDIAIGPVAVVSLLLGTMLTDEIADSKNPDYLRLAYTATFFAGITQLALGFFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGLKTFTKKTDIVSVMRSVWKPVEHGWNWETIVIGMSFLVFILITNYIAKKNKKLFWVAAIAPMISVVVSTFCVYITRADKKGVAIVKHIKKGVNPASASEIFFSGEYFGAGVKIGVVSGMVALTEAVAIARTFAAMKDYSIDGNKEMVAMGTMNIVGSLTSSYVATGSFSRSAVNYMAGCKTAVSNIVMSMVLLLTLLVITPLFKYTPNAVLASIIIAAVMNLVDVQAAILLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAILGKLSGTKVYRNILQYPKATQIPGMLIIRVDSAIYFSNSNYIKDRILKWVTDEEVQRTASEFPSIQSLIVEMSPVTDIDTSGIHALEDLFKSLKKREVQLLLANPGPIVIEKLHASKLSDIIGEDKIFSSVDDAVATFGPKGEVK* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3298 656 Gene3D STAS domain 506 650 IPR036513 -
Lja6g3298 656 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 19 654 - -
Lja6g3298 656 SUPERFAMILY SpoIIaa-like 528 650 IPR036513 -
Lja6g3298 656 TIGRFAM sulP: sulfate permease 82 645 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja6g3298 656 CDD STAS_SulP_like_sulfate_transporter 527 642 - -
Lja6g3298 656 Pfam Sulfate permease family 95 474 IPR011547 GO:0016021
Lja6g3298 656 PANTHER SULFATE TRANSPORTER 19 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja6g3298 656 Pfam STAS domain 527 645 IPR002645 -
Lja6g3298 656 ProSiteProfiles STAS domain profile. 526 649 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3298 Lja-Chr6 61253732 61263813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3298 11 652 Inorganic Solute Cotransporters AT1G22150 70.788 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3298 K17470 - gmx:100784124 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3298 6 61253732 61263813 Lja6g3298 6 61253732 61263813 ECH