Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3290 ATGCATTATATTCCTCACAAAATGGAGGGTGATTTGTCTCACAAAAGCTTCCTTCTAGTGTTTCTTATTGTGCTTACTCTGCAGGCTTTTGCAGTGCATGGCACGAGTGTAGGGTTCTATTCAAAATCATGTCCTTCCATAGAGTCCATTGTTAAGTCCACAGTTGCATCCCATGTGAAAACTGATTTTGAATATGCTGCTGGTTTGCTGAGACTGCACTTTCATGATTGCTTTGTAAGAGGATGTGATGCTTCTATTCTAATTGCTGGTAATGGCACTGAGAAACAAGCTCCCCCAAACCGTAGTTTAAAAGGATATGAAGTTATTGATGAAGCAAAGGCCAAATTAGAGGCTCAGTGCCCTGGTGTTGTGTCCTGTGCTGATATTCTTGCTCTTGCTGCTCGTGATTCTGTTGTTTTGAGTGGTGGATTAAGTTGGCAAGTGCCTACTGGACGCAGAGATGGAAGGGTTTCAATTGAAAATGAAAGTTTTTCTCTGCCTGGTCCTAATGACTCTGTGGCAGTCCAGAAGAAGAAGTTTTCTGATCTGGGTCTTAACGTTCAAGAGCTAGTCACTCTTGCTGGTGGGCATACAATTGGTACAGCTGGTTGTCGGAACGTAGCAGACAGAATTTACAACACAAATGGGACTGATCCTTCAATCGACCCTTCATTTCTTCGAACTCTACGAAGCCTTTGTCCACAAGACCAACCAAGTAAGAGACTTGCAATAGACACTGGAAGTCAGGCCAAGTTTGACACCTCTTACTACGCTAACCTCAAGAAAGGCCATGGAGTTCTCCGTTCTGATCAAGTGCTCTGGACTGATCCTTCCACCAGAGCCATTGTTCAGAAATACTTAGCCGCCACCGGTTGTGGTCCTGGCTCCTTCAACGTCGAATTTGGCAAGGCTATGGTTAAGATGAGTAACATTGGTATTAAGACTGGTGCTAATGGTGAAATTCGCAAAAAATGTTCTGCTATTAATTAA 990 0.4343 MHYIPHKMEGDLSHKSFLLVFLIVLTLQAFAVHGTSVGFYSKSCPSIESIVKSTVASHVKTDFEYAAGLLRLHFHDCFVRGCDASILIAGNGTEKQAPPNRSLKGYEVIDEAKAKLEAQCPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSIENESFSLPGPNDSVAVQKKKFSDLGLNVQELVTLAGGHTIGTAGCRNVADRIYNTNGTDPSIDPSFLRTLRSLCPQDQPSKRLAIDTGSQAKFDTSYYANLKKGHGVLRSDQVLWTDPSTRAIVQKYLAATGCGPGSFNVEFGKAMVKMSNIGIKTGANGEIRKKCSAIN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3290 329 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 Gene3D - 38 329 - -
Lja6g3290 329 Gene3D Peroxidase, domain 2 167 308 - -
Lja6g3290 329 PANTHER PEROXIDASE 19 327 - -
Lja6g3290 329 SUPERFAMILY Heme-dependent peroxidases 36 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 Pfam Peroxidase 51 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 CDD secretory_peroxidase 36 328 IPR033905 GO:0004601|GO:0042744
Lja6g3290 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Lja6g3290 329 ProSiteProfiles Plant heme peroxidase family profile. 34 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PANTHER PEROXIDASE 25-RELATED 19 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Lja6g3290 329 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g3290 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3290 Lja-Chr6 61199787 61204280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3290 16 329 Peroxidase AT5G64120 58.567 2.93e-134 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3290 K00430 - gmx:100789249 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3290 6 61199787 61204280 Lja6g3290 6 61199787 61204280 ECH