Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3259 ATGGAGAGCTTTGCACTCCACTCGCTCTCCACTTCACCCTCCTTCTCTCACTCTTCCTCACTCCGTCATCGTCCTCGCTCTTCAATCACCAGATCCCATCTCTCCCTTCTTCCATTCAATCCCAATTTCTCAACCCCATTTCTCAAATCACACAAACCTTCCACCTTCAAACCCCATTTCTCAAAACCCCATTTCTCATCATCATCAATTCAAGCTTCTTCTTCTTCGTCTACTCCATCACCACCACCACCACCGCCGCCACCTGTTGTTGTTCAGGGTGCAAAACCCATTCCCTTTGTAATCTCCGTCGGCATAGGCCTCATTTTGCGGTTTCTGGTTCCCAAACCAGTGGAAGTCACTCCTCAGGCATGGCAATTGCTCTCGATTTTCATGTCGACAATCGCGGGTTTGGTCCTGAGTCCGTTGCCGGTGGGGGCGTGGGCTTTTCTGGGCTTGACAACCGCCGTCGTGACGAAAACTCTGACGTTCACGGCGGCGTTCAGCGCCTTCACGAACGAGGTGATTTGGTTGATCGTGATCTCGTTCTTCTTTGCTCGTGGGTTTGTGAAGACAGGGTTGGGGGATAGGATTGCTACTTACTTTGTGAAGTGGATGGGGAAGAGCACTCTGGGGTTGTCTTATGGTTTGACATTCAGTGAGGTGCTGATTGCTCCGGCAATGCCTAGCACCACTGCTAGAGCCGGTGGTGTCTTCTTGCCGATTATCAAGTCACTTTCACTCTCCGCTGGGAGTGAACCCAATAGTCCTACATCGAAGAGGCTGGGGGCTTTTCTCGTTCAGAATCAATTTCAGTCTGCTGGTAACTCCAGCGCTCTTTTCCTAACAGCTGCAGCCCAAAATCTGCTGTGTATGAAATTAGCAGAGGAGCTCGGGGTGATAGTTTCAAACCCTTGGGTTACTTGGTTTAAGGCAGCTAGTTTGCCTGCATTCGTTTGCCTTCTTGCTACACCATTGATTTTATACAAAATCTACCCCCCTGAACTCAAAGACACACCAGAGGCACCTGCCCTGGCTGCAAAGAAACTGGAAAGTATGGGGCCTGTCACTCAAAATGAATGGATTATGGTTGCGACAATGCTTCTTGCGGTCTCTTTGTGGATCTTTGGAGAGACAATCGGCATAGCAAGTGCTGTAGCTGCAATGATTGGTTTGTCAATACTCATTGTATTAGGAGTCCTTGACTGGAGTGACTGCTTGAATGAAAAATCGGCATGGGATACCTTGGCTTGGTTCGCCATTCTAGTAGGTATGGCAAGCCAGTTGACAAACCTTGGTATTGTGAGCTGGATGTCCGATTGCGTGGCAACAACCCTTCAGTCTTTCTCTTTGAGCTGGCCAGCTGCACTAGTTGTTCTTCAGGCAGCTTATTTCTTCATCCACTACCTTTTTGCAAGTCAGACTGGACATGTGGGGGCTTTATACGCTGCATTTCTTGCCATGCATAGGGCAGCTGGTGTTCCTGGTGTTCTGGCAGCACTTGCTTTAGGTTACAATACAAATCTTTTTGGCGCAATAACACACTACAGTAGTGGTCAAGCTGCTGTATACTATGGAGCTGGTTATGTAGACCTTCCTGATATATTCAGATTGGGGTTCATCATGGCATTTATTAATGCTGTCATCTGGGGAGGTGTTGGCTCTTTGTGGTGGAAATTTTTGGGCTTGTATTGA 1692 0.4829 MESFALHSLSTSPSFSHSSSLRHRPRSSITRSHLSLLPFNPNFSTPFLKSHKPSTFKPHFSKPHFSSSSIQASSSSSTPSPPPPPPPPVVVQGAKPIPFVISVGIGLILRFLVPKPVEVTPQAWQLLSIFMSTIAGLVLSPLPVGAWAFLGLTTAVVTKTLTFTAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPNSPTSKRLGAFLVQNQFQSAGNSSALFLTAAAQNLLCMKLAEELGVIVSNPWVTWFKAASLPAFVCLLATPLILYKIYPPELKDTPEAPALAAKKLESMGPVTQNEWIMVATMLLAVSLWIFGETIGIASAVAAMIGLSILIVLGVLDWSDCLNEKSAWDTLAWFAILVGMASQLTNLGIVSWMSDCVATTLQSFSLSWPAALVVLQAAYFFIHYLFASQTGHVGALYAAFLAMHRAAGVPGVLAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFRLGFIMAFINAVIWGGVGSLWWKFLGLY* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3259 563 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 15 563 IPR030676 -
Lja6g3259 563 MobiDBLite consensus disorder prediction 62 88 - -
Lja6g3259 563 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 115 557 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lja6g3259 563 PANTHER DICARBOXYLIC ACID TRANSPORTER2 15 563 - -
Lja6g3259 563 MobiDBLite consensus disorder prediction 1 23 - -
Lja6g3259 563 Pfam Sodium:sulfate symporter transmembrane region 105 562 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lja6g3259 563 MobiDBLite consensus disorder prediction 62 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3259 Lja-Chr6 60916156 60920548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3259 1 563 Antiporters AT5G64290 73.592 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3259 - - gmx:100776794 870.537