Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3251 ATGGGAGTGGAGAAGCAACTGTTGAGGCCCGGAACCGGTCCCAAGCCTGTTCCCGGTCAGAACGTGACTGTTCACTGCACTGGTTTCGGGAAAAACGGTGACCTTTCTCAACAGTTTTGGAGCACAAAGGATCCTGGCCAGAAACCTTTCACTTTCAAAATCGGCCAAGGTTCTGTTATCAAAGGATGGGATGAAGGTGTGTTAGGCATGCAAGTTGGTGAAGTTGCTCGTCTTCGGTGCTCCCCTGATTATGCTTATGGTGCTGGTGGCTTTCCTGCTTGGGGAATACAACCAAACTCTGTCCTGGATTTTGAAATTGAAGTCTTAAATGCGCAATGA 339 0.4867 MGVEKQLLRPGTGPKPVPGQNVTVHCTGFGKNGDLSQQFWSTKDPGQKPFTFKIGQGSVIKGWDEGVLGMQVGEVARLRCSPDYAYGAGGFPAWGIQPNSVLDFEIEVLNAQ* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3251 112 Gene3D - 1 112 IPR046357 GO:0003755
Lja6g3251 112 PANTHER PEPTIDYLPROLYL ISOMERASE 1 110 - -
Lja6g3251 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Lja6g3251 112 SUPERFAMILY FKBP-like 2 110 - -
Lja6g3251 112 MobiDBLite consensus disorder prediction 1 21 - -
Lja6g3251 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 110 - -
Lja6g3251 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 14 109 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3251 Lja-Chr6 60849806 60851226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g3251 2 109 Calmodulin-binding Proteins AT3G25230 41.284 9.82e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3251 K01802 - gmx:100305505 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3251 6 60849806 60851226 Lja6g3251 6 60849806 60851226 ECH